RNA–Protein interactions for RNA: ENST00000451013.6

GTF2IRD2-201, Transcript of GTF2I repeat domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2IRD2, Length 3,558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2-201ENST00000451013 NISCHQ9Y2I1 1504 aa26.74■■□□□ 1.87
GTF2IRD2-201ENST00000451013 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
GTF2IRD2-201ENST00000451013 SUPT5HO00267 1087 aaKnown RBP23.93■■□□□ 1.42
GTF2IRD2-201ENST00000451013 DCAF8L2P0C7V8 631 aa23.71■■□□□ 1.39
GTF2IRD2-201ENST00000451013 PCGF6Q9BYE7 350 aa22.85■■□□□ 1.25
GTF2IRD2-201ENST00000451013 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
GTF2IRD2-201ENST00000451013 MYO15BQ96JP2 1530 aa22.58■■□□□ 1.2
GTF2IRD2-201ENST00000451013 LOC105371045A0A1W2PR82 267 aa22.56■■□□□ 1.2
GTF2IRD2-201ENST00000451013 ZCCHC6Q5VYS8 1495 aaKnown RBP22.53■■□□□ 1.2
GTF2IRD2-201ENST00000451013 HRCP23327 699 aa22.52■■□□□ 1.2
GTF2IRD2-201ENST00000451013 PPARGC1BQ86YN6 1023 aaKnown RBP22.52■■□□□ 1.2
GTF2IRD2-201ENST00000451013 EHMT2Q96KQ7 1210 aa22.52■■□□□ 1.2
GTF2IRD2-201ENST00000451013 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
GTF2IRD2-201ENST00000451013 CCDC180Q9P1Z9 1646 aa22.08■■□□□ 1.13
GTF2IRD2-201ENST00000451013 TRIM41Q8WV44 630 aa21.98■■□□□ 1.11
GTF2IRD2-201ENST00000451013 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.1
GTF2IRD2-201ENST00000451013 TTBK1Q5TCY1 1321 aaPredicted RBP21.76■■□□□ 1.07
GTF2IRD2-201ENST00000451013 DCAF1Q9Y4B6 1507 aa21.65■■□□□ 1.06
GTF2IRD2-201ENST00000451013 SCRIBQ14160 1630 aa21.59■■□□□ 1.05
GTF2IRD2-201ENST00000451013 RSF1Q96T23 1441 aaPredicted RBP21.48■■□□□ 1.03
GTF2IRD2-201ENST00000451013 ABCC9O60706 1549 aa21.42■■□□□ 1.02
GTF2IRD2-201ENST00000451013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.4■■□□□ 1.02
GTF2IRD2-201ENST00000451013 ZEB1P37275 1124 aaPredicted RBP21.4■■□□□ 1.02
GTF2IRD2-201ENST00000451013 CCER1Q8TC90 406 aaPredicted RBP21.35■■□□□ 1.01
GTF2IRD2-201ENST00000451013 RB1CC1Q8TDY2 1594 aa21.27■■□□□ 1
GTF2IRD2-201ENST00000451013 CECR2Q9BXF3 1484 aa21.21■□□□□ 0.99
GTF2IRD2-201ENST00000451013 RANGAP1P46060 587 aaPredicted RBP21.15■□□□□ 0.98
GTF2IRD2-201ENST00000451013 UBTFP17480 764 aaKnown RBP21.1■□□□□ 0.97
GTF2IRD2-201ENST00000451013 SCAF1Q9H7N4 1312 aaKnown RBP21.07■□□□□ 0.96
GTF2IRD2-201ENST00000451013 MROH2BQ7Z745 1585 aa21■□□□□ 0.95
GTF2IRD2-201ENST00000451013 YTHDC1Q96MU7 727 aaKnown RBP20.93■□□□□ 0.94
GTF2IRD2-201ENST00000451013 PABPN1Q86U42 306 aaKnown RBP eCLIP20.92■□□□□ 0.94
GTF2IRD2-201ENST00000451013 DIEXFQ68CQ4 756 aaKnown RBP20.89■□□□□ 0.93
GTF2IRD2-201ENST00000451013 WIZO95785 1651 aa20.87■□□□□ 0.93
GTF2IRD2-201ENST00000451013 HNRNPUL2Q1KMD3 747 aaKnown RBP20.87■□□□□ 0.93
GTF2IRD2-201ENST00000451013 NEUROD1Q13562 356 aa20.82■□□□□ 0.92
GTF2IRD2-201ENST00000451013 GTF3C3Q9Y5Q9 886 aa20.75■□□□□ 0.91
GTF2IRD2-201ENST00000451013 ABCC8Q09428 1581 aa20.74■□□□□ 0.91
GTF2IRD2-201ENST00000451013 ACIN1Q9UKV3 1341 aaKnown RBP20.72■□□□□ 0.91
GTF2IRD2-201ENST00000451013 CENPBP07199 599 aaPredicted RBP20.71■□□□□ 0.91
GTF2IRD2-201ENST00000451013 CSRNP3Q8WYN3 585 aa20.7■□□□□ 0.9
GTF2IRD2-201ENST00000451013 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
GTF2IRD2-201ENST00000451013 SOGA1O94964 1423 aa20.68■□□□□ 0.9
GTF2IRD2-201ENST00000451013 APLP2Q06481 763 aa20.67■□□□□ 0.9
GTF2IRD2-201ENST00000451013 NACADO15069 1562 aa20.66■□□□□ 0.9
GTF2IRD2-201ENST00000451013 CEP162Q5TB80 1403 aa20.62■□□□□ 0.89
GTF2IRD2-201ENST00000451013 PELP1Q8IZL8 1130 aaKnown RBP20.61■□□□□ 0.89
GTF2IRD2-201ENST00000451013 RUSC2Q8N2Y8 1516 aa20.55■□□□□ 0.88
GTF2IRD2-201ENST00000451013 ZNF316A6NFI3 1004 aaPredicted RBP20.51■□□□□ 0.87
GTF2IRD2-201ENST00000451013 BAZ1AQ9NRL2 1556 aaPredicted RBP20.5■□□□□ 0.87
GTF2IRD2-201ENST00000451013 ITGAEP38570 1179 aa20.44■□□□□ 0.86
GTF2IRD2-201ENST00000451013 MIER1Q8N108 512 aa20.41■□□□□ 0.86
GTF2IRD2-201ENST00000451013 TNIKQ9UKE5 1360 aa20.39■□□□□ 0.85
GTF2IRD2-201ENST00000451013 TOP2AP11388 1531 aaKnown RBP20.3■□□□□ 0.84
GTF2IRD2-201ENST00000451013 WRNQ14191 1432 aaPredicted RBP eCLIP20.29■□□□□ 0.84
GTF2IRD2-201ENST00000451013 SMARCA2P51531 1590 aa20.26■□□□□ 0.83
GTF2IRD2-201ENST00000451013 CLIP1P30622 1438 aa20.25■□□□□ 0.83
GTF2IRD2-201ENST00000451013 SMARCA4P51532 1647 aa20.25■□□□□ 0.83
GTF2IRD2-201ENST00000451013 GOLGA3Q08378 1498 aa20.25■□□□□ 0.83
GTF2IRD2-201ENST00000451013 ATP1B4Q9UN42 357 aaPredicted RBP20.22■□□□□ 0.83
GTF2IRD2-201ENST00000451013 EEA1Q15075 1411 aa20.14■□□□□ 0.81
GTF2IRD2-201ENST00000451013 EIF4G1Q04637 1599 aaKnown RBP20.12■□□□□ 0.81
GTF2IRD2-201ENST00000451013 CEP164Q9UPV0 1460 aa20.07■□□□□ 0.8
GTF2IRD2-201ENST00000451013 KANK4Q5T7N3 995 aaPredicted RBP20.06■□□□□ 0.8
GTF2IRD2-201ENST00000451013 RAPGEF2Q9Y4G8 1499 aa20.06■□□□□ 0.8
GTF2IRD2-201ENST00000451013 P3H3Q8IVL6 736 aa20■□□□□ 0.79
GTF2IRD2-201ENST00000451013 VPS8Q8N3P4 1428 aa19.99■□□□□ 0.79
GTF2IRD2-201ENST00000451013 BAZ1BQ9UIG0 1483 aaKnown RBP19.97■□□□□ 0.79
GTF2IRD2-201ENST00000451013 SYNJ1O43426 1573 aa19.96■□□□□ 0.79
GTF2IRD2-201ENST00000451013 FAM50AQ14320 339 aaKnown RBP19.93■□□□□ 0.78
GTF2IRD2-201ENST00000451013 BCANQ96GW7 911 aa19.93■□□□□ 0.78
GTF2IRD2-201ENST00000451013 HIRIP3Q9BW71 556 aaPredicted RBP19.91■□□□□ 0.78
GTF2IRD2-201ENST00000451013 UNC13AQ9UPW8 1703 aa19.88■□□□□ 0.77
GTF2IRD2-201ENST00000451013 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
GTF2IRD2-201ENST00000451013 KCNH8Q96L42 1107 aa19.83■□□□□ 0.76
GTF2IRD2-201ENST00000451013 DDX10Q13206 875 aaKnown RBP19.79■□□□□ 0.76
GTF2IRD2-201ENST00000451013 DHX57Q6P158 1386 aaKnown RBP19.78■□□□□ 0.76
GTF2IRD2-201ENST00000451013 KIF21BO75037 1637 aa19.78■□□□□ 0.76
GTF2IRD2-201ENST00000451013 BICRAQ9NZM4 1560 aa19.76■□□□□ 0.75
GTF2IRD2-201ENST00000451013 SIN3AQ96ST3 1273 aa19.76■□□□□ 0.75
GTF2IRD2-201ENST00000451013 SUPT16HQ9Y5B9 1047 aaKnown RBP19.71■□□□□ 0.75
GTF2IRD2-201ENST00000451013 CCNB3Q8WWL7 1395 aa19.65■□□□□ 0.74
GTF2IRD2-201ENST00000451013 ARAP1Q96P48 1450 aa19.65■□□□□ 0.74
GTF2IRD2-201ENST00000451013 KIF27Q86VH2 1401 aa19.64■□□□□ 0.74
GTF2IRD2-201ENST00000451013 TRIM52Q96A61 297 aa19.64■□□□□ 0.73
GTF2IRD2-201ENST00000451013 FKBP8Q14318 412 aa19.6■□□□□ 0.73
GTF2IRD2-201ENST00000451013 RAB3GAP2Q9H2M9 1393 aa19.58■□□□□ 0.73
GTF2IRD2-201ENST00000451013 CNGB1Q14028 1251 aaPredicted RBP19.57■□□□□ 0.72
GTF2IRD2-201ENST00000451013 ARID3CA6NKF2 412 aa19.56■□□□□ 0.72
GTF2IRD2-201ENST00000451013 CLSPNQ9HAW4 1339 aa19.55■□□□□ 0.72
GTF2IRD2-201ENST00000451013 CUX2O14529 1486 aa19.54■□□□□ 0.72
GTF2IRD2-201ENST00000451013 NEFLP07196 543 aa19.52■□□□□ 0.71
GTF2IRD2-201ENST00000451013 MYT1Q01538 1121 aa19.52■□□□□ 0.71
GTF2IRD2-201ENST00000451013 PRXQ9BXM0 1461 aa19.51■□□□□ 0.71
GTF2IRD2-201ENST00000451013 TOP2BQ02880 1626 aa19.49■□□□□ 0.71
GTF2IRD2-201ENST00000451013 PEG3Q9GZU2 1588 aa19.46■□□□□ 0.71
GTF2IRD2-201ENST00000451013 CUX1P39880 1505 aa19.46■□□□□ 0.71
GTF2IRD2-201ENST00000451013 ARHGAP35Q9NRY4 1499 aa19.46■□□□□ 0.71
GTF2IRD2-201ENST00000451013 CARMIL1Q5VZK9 1371 aa19.46■□□□□ 0.71
GTF2IRD2-201ENST00000451013 ANP32CO43423 234 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms