Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHATP28329 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHATP28329 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHATP28329 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CHATP28329 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHATP28329 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.4□□□□□ -0.26
CHATP28329 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHATP28329 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHATP28329 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.4□□□□□ -0.27
CHATP28329 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
CHATP28329 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
CHATP28329 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CHATP28329 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CHATP28329 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CHATP28329 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CHATP28329 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.39□□□□□ -0.27
CHATP28329 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CHATP28329 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CHATP28329 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CHATP28329 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 AL671277.1-201ENST00000429656 993 ntBASIC13.39□□□□□ -0.27
CHATP28329 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.39□□□□□ -0.27
CHATP28329 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.39□□□□□ -0.27
CHATP28329 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.39□□□□□ -0.27
CHATP28329 RNA5SP416-201ENST00000516838 111 ntBASIC13.39□□□□□ -0.27
CHATP28329 AC106730.1-201ENST00000566722 1090 ntBASIC13.39□□□□□ -0.27
CHATP28329 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.39□□□□□ -0.27
CHATP28329 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.39□□□□□ -0.27
CHATP28329 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 CYP4F24P-201ENST00000586049 1580 ntBASIC13.39□□□□□ -0.27
CHATP28329 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 LINC01101-201ENST00000622953 1884 ntBASIC13.39□□□□□ -0.27
CHATP28329 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.39□□□□□ -0.27
CHATP28329 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CHATP28329 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CHATP28329 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CHATP28329 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.39□□□□□ -0.27
CHATP28329 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.39□□□□□ -0.27
CHATP28329 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CHATP28329 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CHATP28329 KRT8P37-201ENST00000451609 1420 ntBASIC13.39□□□□□ -0.27
CHATP28329 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CHATP28329 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.39□□□□□ -0.27
CHATP28329 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHATP28329 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.38□□□□□ -0.27
CHATP28329 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CHATP28329 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.38□□□□□ -0.27
CHATP28329 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 AGAP7P-201ENST00000582299 2062 ntBASIC13.38□□□□□ -0.27
CHATP28329 AGAP14-201ENST00000624701 2060 ntBASIC13.38□□□□□ -0.27
CHATP28329 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.38□□□□□ -0.27
CHATP28329 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.38□□□□□ -0.27
CHATP28329 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.38□□□□□ -0.27
CHATP28329 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.38□□□□□ -0.27
CHATP28329 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.38□□□□□ -0.27
CHATP28329 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CHATP28329 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CHATP28329 AL139010.1-201ENST00000454878 894 ntBASIC13.38□□□□□ -0.27
CHATP28329 PHKG1P2-201ENST00000457537 863 ntBASIC13.38□□□□□ -0.27
CHATP28329 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHATP28329 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.38□□□□□ -0.27
CHATP28329 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.38□□□□□ -0.27
CHATP28329 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.38□□□□□ -0.27
CHATP28329 FAM86C2P-203ENST00000528684 1004 ntBASIC13.38□□□□□ -0.27
CHATP28329 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.38□□□□□ -0.27
CHATP28329 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms