Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.15□□□□□ -0.14
GDF1P27539 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.15□□□□□ -0.14
GDF1P27539 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.15□□□□□ -0.14
GDF1P27539 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
GDF1P27539 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.15□□□□□ -0.14
GDF1P27539 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.15□□□□□ -0.14
GDF1P27539 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.15□□□□□ -0.14
GDF1P27539 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.15□□□□□ -0.14
GDF1P27539 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.15□□□□□ -0.14
GDF1P27539 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.15□□□□□ -0.14
GDF1P27539 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.15□□□□□ -0.14
GDF1P27539 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.15□□□□□ -0.14
GDF1P27539 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.15□□□□□ -0.14
GDF1P27539 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.15□□□□□ -0.14
GDF1P27539 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.15□□□□□ -0.14
GDF1P27539 AC010319.3-201ENST00000597028 470 ntBASIC14.15□□□□□ -0.14
GDF1P27539 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.15□□□□□ -0.14
GDF1P27539 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.15□□□□□ -0.14
GDF1P27539 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.15□□□□□ -0.14
GDF1P27539 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GDF1P27539 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
GDF1P27539 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.15□□□□□ -0.14
GDF1P27539 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.15□□□□□ -0.14
GDF1P27539 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
GDF1P27539 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
GDF1P27539 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
GDF1P27539 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
GDF1P27539 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.14□□□□□ -0.15
GDF1P27539 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GDF1P27539 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.14□□□□□ -0.15
GDF1P27539 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
GDF1P27539 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GDF1P27539 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
GDF1P27539 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.14□□□□□ -0.15
GDF1P27539 GPR53P-205ENST00000457298 1084 ntBASIC14.14□□□□□ -0.15
GDF1P27539 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.14□□□□□ -0.15
GDF1P27539 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.14□□□□□ -0.15
GDF1P27539 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.14□□□□□ -0.15
GDF1P27539 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
GDF1P27539 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.14□□□□□ -0.15
GDF1P27539 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.14□□□□□ -0.15
GDF1P27539 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.14□□□□□ -0.15
GDF1P27539 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GDF1P27539 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.14□□□□□ -0.15
GDF1P27539 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GDF1P27539 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
GDF1P27539 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.14□□□□□ -0.15
GDF1P27539 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDF1P27539 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
GDF1P27539 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.13□□□□□ -0.15
GDF1P27539 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.13□□□□□ -0.15
GDF1P27539 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms