Protein–RNA interactions for Protein: Q587J8

KHDC3L, KHDC3-like protein, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3LQ587J8 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KHDC3LQ587J8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.58□□□□□ -0.4
KHDC3LQ587J8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
KHDC3LQ587J8 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KHDC3LQ587J8 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.58□□□□□ -0.4
KHDC3LQ587J8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
KHDC3LQ587J8 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 AL023775.1-201ENST00000454907 1746 ntBASIC12.57□□□□□ -0.4
KHDC3LQ587J8 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 AC132008.2-207ENST00000454517 770 ntBASIC12.57□□□□□ -0.4
KHDC3LQ587J8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 AC116407.4-201ENST00000623319 1061 ntBASIC12.57□□□□□ -0.4
KHDC3LQ587J8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 AC012569.1-201ENST00000591191 1524 ntBASIC12.57□□□□□ -0.4
KHDC3LQ587J8 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KHDC3LQ587J8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.56□□□□□ -0.4
KHDC3LQ587J8 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 AL928921.2-201ENST00000641325 2442 ntBASIC12.56□□□□□ -0.4
KHDC3LQ587J8 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KHDC3LQ587J8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms