Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.16□□□□□ -0.14
CDK5Q00535 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK5Q00535 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.16□□□□□ -0.14
CDK5Q00535 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.16□□□□□ -0.14
CDK5Q00535 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.16□□□□□ -0.14
CDK5Q00535 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK5Q00535 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.16□□□□□ -0.14
CDK5Q00535 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.16□□□□□ -0.14
CDK5Q00535 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CDK5Q00535 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK5Q00535 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK5Q00535 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CDK5Q00535 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK5Q00535 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK5Q00535 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.16□□□□□ -0.14
CDK5Q00535 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDK5Q00535 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK5Q00535 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK5Q00535 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK5Q00535 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK5Q00535 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK5Q00535 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK5Q00535 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDK5Q00535 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.15□□□□□ -0.14
CDK5Q00535 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDK5Q00535 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
CDK5Q00535 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
CDK5Q00535 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CDK5Q00535 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK5Q00535 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.15□□□□□ -0.14
CDK5Q00535 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK5Q00535 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 AL450487.1-201ENST00000426799 995 ntBASIC14.15□□□□□ -0.14
CDK5Q00535 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK5Q00535 RN7SL589P-201ENST00000481268 310 ntBASIC14.15□□□□□ -0.14
CDK5Q00535 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK5Q00535 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.15□□□□□ -0.14
CDK5Q00535 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
CDK5Q00535 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CDK5Q00535 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.15□□□□□ -0.14
CDK5Q00535 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK5Q00535 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.15□□□□□ -0.14
CDK5Q00535 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDK5Q00535 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.15□□□□□ -0.14
CDK5Q00535 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDK5Q00535 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CDK5Q00535 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK5Q00535 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDK5Q00535 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CDK5Q00535 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CDK5Q00535 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CDK5Q00535 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK5Q00535 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK5Q00535 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK5Q00535 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK5Q00535 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.14□□□□□ -0.15
CDK5Q00535 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK5Q00535 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CDK5Q00535 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK5Q00535 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK5Q00535 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDK5Q00535 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK5Q00535 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK5Q00535 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDK5Q00535 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CDK5Q00535 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CDK5Q00535 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
CDK5Q00535 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.14□□□□□ -0.15
CDK5Q00535 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.14□□□□□ -0.15
CDK5Q00535 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
CDK5Q00535 ADH5P3-201ENST00000433842 1137 ntBASIC14.14□□□□□ -0.15
CDK5Q00535 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.14□□□□□ -0.15
CDK5Q00535 SPCS2P4-201ENST00000436160 681 ntBASIC14.14□□□□□ -0.15
CDK5Q00535 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms