Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RAB5BP61020 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 AC023024.2-201ENST00000623561 1993 ntBASIC12.29□□□□□ -0.44
RAB5BP61020 AL135905.2-201ENST00000584934 1404 ntBASIC12.28□□□□□ -0.44
RAB5BP61020 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.28□□□□□ -0.44
RAB5BP61020 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
RAB5BP61020 PCDHB18P-202ENST00000526308 3197 ntBASIC12.28□□□□□ -0.44
RAB5BP61020 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB5BP61020 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.28□□□□□ -0.44
RAB5BP61020 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB5BP61020 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.28□□□□□ -0.44
RAB5BP61020 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB5BP61020 KRT17P3-201ENST00000420566 1262 ntBASIC12.28□□□□□ -0.44
RAB5BP61020 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB5BP61020 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
RAB5BP61020 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB5BP61020 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB5BP61020 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RAB5BP61020 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB5BP61020 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.28□□□□□ -0.44
RAB5BP61020 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
RAB5BP61020 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC12.28□□□□□ -0.44
RAB5BP61020 AC024563.2-201ENST00000603282 481 ntBASIC12.28□□□□□ -0.44
RAB5BP61020 CR769767.2-201ENST00000622735 460 ntBASIC12.28□□□□□ -0.44
RAB5BP61020 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RAB5BP61020 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB5BP61020 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB5BP61020 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB5BP61020 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RAB5BP61020 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB5BP61020 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
RAB5BP61020 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
RAB5BP61020 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RAB5BP61020 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RAB5BP61020 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB5BP61020 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RAB5BP61020 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5BP61020 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.27□□□□□ -0.44
RAB5BP61020 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.27□□□□□ -0.44
RAB5BP61020 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.27□□□□□ -0.44
RAB5BP61020 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
RAB5BP61020 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB5BP61020 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
RAB5BP61020 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
RAB5BP61020 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB5BP61020 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.27□□□□□ -0.44
RAB5BP61020 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB5BP61020 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB5BP61020 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.27□□□□□ -0.45
RAB5BP61020 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB5BP61020 AC112698.1-201ENST00000510299 916 ntBASIC12.27□□□□□ -0.45
RAB5BP61020 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB5BP61020 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.27□□□□□ -0.45
RAB5BP61020 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC12.27□□□□□ -0.45
RAB5BP61020 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB5BP61020 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.27□□□□□ -0.45
RAB5BP61020 AC134407.3-201ENST00000624035 2139 ntBASIC12.27□□□□□ -0.45
RAB5BP61020 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB5BP61020 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms