RNA–Protein interactions for RNA: ENST00000291539.10

PDE9A-201, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-201ENST00000291539 NISCHQ9Y2I1 1504 aa23.82■■□□□ 1.4
PDE9A-201ENST00000291539 PELP1Q8IZL8 1130 aaKnown RBP22.42■■□□□ 1.18
PDE9A-201ENST00000291539 HRCP23327 699 aa22.19■■□□□ 1.14
PDE9A-201ENST00000291539 MYT1Q01538 1121 aa21.82■■□□□ 1.08
PDE9A-201ENST00000291539 PPARGC1BQ86YN6 1023 aaKnown RBP21.38■■□□□ 1.01
PDE9A-201ENST00000291539 PCGF6Q9BYE7 350 aa21.25■□□□□ 0.99
PDE9A-201ENST00000291539 SCAF1Q9H7N4 1312 aaKnown RBP21.16■□□□□ 0.98
PDE9A-201ENST00000291539 MYO15BQ96JP2 1530 aa21.02■□□□□ 0.96
PDE9A-201ENST00000291539 DCAF1Q9Y4B6 1507 aa20.95■□□□□ 0.95
PDE9A-201ENST00000291539 ZEB1P37275 1124 aaPredicted RBP20.83■□□□□ 0.93
PDE9A-201ENST00000291539 CCDC180Q9P1Z9 1646 aa20.77■□□□□ 0.92
PDE9A-201ENST00000291539 CHIC1Q5VXU3 224 aa20.76■□□□□ 0.91
PDE9A-201ENST00000291539 TTBK1Q5TCY1 1321 aaPredicted RBP20.71■□□□□ 0.91
PDE9A-201ENST00000291539 TRIM26Q12899 539 aaPredicted RBP20.68■□□□□ 0.9
PDE9A-201ENST00000291539 SUPT5HO00267 1087 aaKnown RBP20.65■□□□□ 0.9
PDE9A-201ENST00000291539 ACIN1Q9UKV3 1341 aaKnown RBP20.59■□□□□ 0.89
PDE9A-201ENST00000291539 SHROOM4Q9ULL8 1493 aa20.46■□□□□ 0.87
PDE9A-201ENST00000291539 NEUROD1Q13562 356 aa20.38■□□□□ 0.85
PDE9A-201ENST00000291539 GTF3C3Q9Y5Q9 886 aa20.32■□□□□ 0.84
PDE9A-201ENST00000291539 CENPBP07199 599 aaPredicted RBP20.28■□□□□ 0.84
PDE9A-201ENST00000291539 LOC105371045A0A1W2PR82 267 aa20.12■□□□□ 0.81
PDE9A-201ENST00000291539 ZCCHC6Q5VYS8 1495 aaKnown RBP20.04■□□□□ 0.8
PDE9A-201ENST00000291539 BCL11AQ9H165 835 aa19.96■□□□□ 0.79
PDE9A-201ENST00000291539 DIEXFQ68CQ4 756 aaKnown RBP19.89■□□□□ 0.77
PDE9A-201ENST00000291539 DCAF8L2P0C7V8 631 aa19.85■□□□□ 0.77
PDE9A-201ENST00000291539 FAM9AQ8IZU1 332 aaPredicted RBP19.74■□□□□ 0.75
PDE9A-201ENST00000291539 ANP32EQ9BTT0 268 aa19.73■□□□□ 0.75
PDE9A-201ENST00000291539 TRIM41Q8WV44 630 aa19.66■□□□□ 0.74
PDE9A-201ENST00000291539 CLSPNQ9HAW4 1339 aa19.59■□□□□ 0.73
PDE9A-201ENST00000291539 CCER1Q8TC90 406 aaPredicted RBP19.56■□□□□ 0.72
PDE9A-201ENST00000291539 PRKCSHP14314 528 aaPredicted RBP19.54■□□□□ 0.72
PDE9A-201ENST00000291539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.49■□□□□ 0.71
PDE9A-201ENST00000291539 ZNF316A6NFI3 1004 aaPredicted RBP19.46■□□□□ 0.71
PDE9A-201ENST00000291539 ABCC9O60706 1549 aa19.42■□□□□ 0.7
PDE9A-201ENST00000291539 CSRNP3Q8WYN3 585 aa19.39■□□□□ 0.69
PDE9A-201ENST00000291539 ERICH6Q7L0X2 663 aa19.37■□□□□ 0.69
PDE9A-201ENST00000291539 YTHDC1Q96MU7 727 aaKnown RBP19.36■□□□□ 0.69
PDE9A-201ENST00000291539 TSHZ2Q9NRE2 1034 aa19.36■□□□□ 0.69
PDE9A-201ENST00000291539 SUPT16HQ9Y5B9 1047 aaKnown RBP19.29■□□□□ 0.68
PDE9A-201ENST00000291539 MIER1Q8N108 512 aa19.28■□□□□ 0.68
PDE9A-201ENST00000291539 APLP2Q06481 763 aa19.13■□□□□ 0.65
PDE9A-201ENST00000291539 NACADO15069 1562 aa19.12■□□□□ 0.65
PDE9A-201ENST00000291539 SCRIBQ14160 1630 aa19.11■□□□□ 0.65
PDE9A-201ENST00000291539 WRNQ14191 1432 aaPredicted RBP eCLIP19■□□□□ 0.63
PDE9A-201ENST00000291539 RB1CC1Q8TDY2 1594 aa18.92■□□□□ 0.62
PDE9A-201ENST00000291539 MYT1LQ9UL68 1186 aa18.89■□□□□ 0.61
PDE9A-201ENST00000291539 RBM19Q9Y4C8 960 aaKnown RBP18.85■□□□□ 0.61
PDE9A-201ENST00000291539 RSF1Q96T23 1441 aaPredicted RBP18.79■□□□□ 0.6
PDE9A-201ENST00000291539 EHMT2Q96KQ7 1210 aa18.73■□□□□ 0.59
PDE9A-201ENST00000291539 FANCIQ9NVI1 1328 aa18.7■□□□□ 0.58
PDE9A-201ENST00000291539 MSH5O43196 834 aa18.7■□□□□ 0.58
PDE9A-201ENST00000291539 ERICH6BQ5W0A0 696 aa18.62■□□□□ 0.57
PDE9A-201ENST00000291539 CEP162Q5TB80 1403 aa18.59■□□□□ 0.57
PDE9A-201ENST00000291539 FKBP8Q14318 412 aa18.59■□□□□ 0.57
PDE9A-201ENST00000291539 CECR2Q9BXF3 1484 aa18.57■□□□□ 0.56
PDE9A-201ENST00000291539 ANO8Q9HCE9 1232 aaPredicted RBP18.57■□□□□ 0.56
PDE9A-201ENST00000291539 UNC13AQ9UPW8 1703 aa18.56■□□□□ 0.56
PDE9A-201ENST00000291539 DEKP35659 375 aaKnown RBP18.54■□□□□ 0.56
PDE9A-201ENST00000291539 BCANQ96GW7 911 aa18.54■□□□□ 0.56
PDE9A-201ENST00000291539 TNIKQ9UKE5 1360 aa18.53■□□□□ 0.56
PDE9A-201ENST00000291539 NEFLP07196 543 aa18.5■□□□□ 0.55
PDE9A-201ENST00000291539 MROH2BQ7Z745 1585 aa18.46■□□□□ 0.55
PDE9A-201ENST00000291539 UBE2Q2Q8WVN8 375 aa18.46■□□□□ 0.55
PDE9A-201ENST00000291539 PABPN1Q86U42 306 aaKnown RBP eCLIP18.45■□□□□ 0.54
PDE9A-201ENST00000291539 HNRNPUL2Q1KMD3 747 aaKnown RBP18.38■□□□□ 0.53
PDE9A-201ENST00000291539 BICRAQ9NZM4 1560 aa18.37■□□□□ 0.53
PDE9A-201ENST00000291539 EIF4G1Q04637 1599 aaKnown RBP18.35■□□□□ 0.53
PDE9A-201ENST00000291539 BAZ1AQ9NRL2 1556 aaPredicted RBP18.35■□□□□ 0.53
PDE9A-201ENST00000291539 SALL2Q9Y467 1007 aaPredicted RBP18.35■□□□□ 0.53
PDE9A-201ENST00000291539 WIZO95785 1651 aa18.33■□□□□ 0.52
PDE9A-201ENST00000291539 CDK11AQ9UQ88 783 aaPredicted RBP18.33■□□□□ 0.52
PDE9A-201ENST00000291539 DHX57Q6P158 1386 aaKnown RBP18.32■□□□□ 0.52
PDE9A-201ENST00000291539 EEA1Q15075 1411 aa18.3■□□□□ 0.52
PDE9A-201ENST00000291539 ITGAEP38570 1179 aa18.3■□□□□ 0.52
PDE9A-201ENST00000291539 KCNH8Q96L42 1107 aa18.3■□□□□ 0.52
PDE9A-201ENST00000291539 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
PDE9A-201ENST00000291539 CCER2I3L3R5 266 aa18.2■□□□□ 0.5
PDE9A-201ENST00000291539 GOLGA3Q08378 1498 aa18.18■□□□□ 0.5
PDE9A-201ENST00000291539 NOP58Q9Y2X3 529 aaKnown RBP18.15■□□□□ 0.5
PDE9A-201ENST00000291539 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.49
PDE9A-201ENST00000291539 ABCC8Q09428 1581 aa18.13■□□□□ 0.49
PDE9A-201ENST00000291539 VPS8Q8N3P4 1428 aa18.1■□□□□ 0.49
PDE9A-201ENST00000291539 CCDC136Q96JN2 1154 aa18.1■□□□□ 0.49
PDE9A-201ENST00000291539 UBTFP17480 764 aaKnown RBP18.09■□□□□ 0.49
PDE9A-201ENST00000291539 SOGA1O94964 1423 aa18.08■□□□□ 0.49
PDE9A-201ENST00000291539 TOP2AP11388 1531 aaKnown RBP18.08■□□□□ 0.48
PDE9A-201ENST00000291539 CUX2O14529 1486 aa18.07■□□□□ 0.48
PDE9A-201ENST00000291539 CLIP1P30622 1438 aa18.05■□□□□ 0.48
PDE9A-201ENST00000291539 PPP1R15AO75807 674 aaPredicted RBP18.04■□□□□ 0.48
PDE9A-201ENST00000291539 IL27Q8NEV9 243 aa18.03■□□□□ 0.48
PDE9A-201ENST00000291539 PPP4R2Q9NY27 417 aa18.03■□□□□ 0.48
PDE9A-201ENST00000291539 NBR1Q14596 966 aa18.02■□□□□ 0.48
PDE9A-201ENST00000291539 RTL5Q5HYW3 569 aaPredicted RBP18.02■□□□□ 0.48
PDE9A-201ENST00000291539 TRIM52Q96A61 297 aa18.02■□□□□ 0.48
PDE9A-201ENST00000291539 C11orf95C9JLR9 678 aaPredicted RBP18■□□□□ 0.47
PDE9A-201ENST00000291539 DDX10Q13206 875 aaKnown RBP17.98■□□□□ 0.47
PDE9A-201ENST00000291539 PAK3O75914 559 aaPredicted RBP17.97■□□□□ 0.47
PDE9A-201ENST00000291539 WASHC2AQ641Q2 1341 aa17.97■□□□□ 0.47
PDE9A-201ENST00000291539 KIF21BO75037 1637 aa17.97■□□□□ 0.47
PDE9A-201ENST00000291539 CEP164Q9UPV0 1460 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms