Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 PAX6-208ENST00000379132 2576 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
PCP4P48539 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
PCP4P48539 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 AC023794.5-201ENST00000564380 2157 ntBASIC10.42□□□□□ -0.74
PCP4P48539 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC10.42□□□□□ -0.74
PCP4P48539 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 PAX6-257ENST00000639409 2450 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC10.42□□□□□ -0.74
PCP4P48539 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
PCP4P48539 GOLGA6D-201ENST00000434739 2123 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
PCP4P48539 CAPN10-AS1-201ENST00000567819 4000 ntBASIC10.42□□□□□ -0.74
PCP4P48539 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
PCP4P48539 CROT-203ENST00000419147 2959 ntTSL 2 BASIC10.41□□□□□ -0.74
PCP4P48539 ZNF839-206ENST00000558850 2971 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
PCP4P48539 SPRTN-204ENST00000391858 3559 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 ADGRE2-206ENST00000594294 2325 ntTSL 5 BASIC10.41□□□□□ -0.74
PCP4P48539 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC10.41□□□□□ -0.74
PCP4P48539 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 KCNK5-201ENST00000359534 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC10.41□□□□□ -0.74
PCP4P48539 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
PCP4P48539 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 BAHD1-202ENST00000560846 4432 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 MDH2-205ENST00000461263 648 ntTSL 2 BASIC10.41□□□□□ -0.74
PCP4P48539 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC10.41□□□□□ -0.74
PCP4P48539 AC010503.4-201ENST00000615487 688 ntBASIC10.41□□□□□ -0.74
PCP4P48539 AL031602.1-201ENST00000633169 911 ntBASIC10.41□□□□□ -0.74
PCP4P48539 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
PCP4P48539 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC10.41□□□□□ -0.74
PCP4P48539 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
PCP4P48539 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 Z98257.2-202ENST00000641138 1548 ntBASIC10.41□□□□□ -0.74
PCP4P48539 ZNF682-202ENST00000397162 3164 ntTSL 4 BASIC10.41□□□□□ -0.74
PCP4P48539 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 TLE3-213ENST00000558379 2304 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC10.41□□□□□ -0.74
PCP4P48539 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC10.41□□□□□ -0.74
PCP4P48539 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 CDKL1-201ENST00000216378 2209 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC10.41□□□□□ -0.74
PCP4P48539 ARHGEF34P-201ENST00000483587 4532 ntBASIC10.41□□□□□ -0.74
PCP4P48539 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC10.41□□□□□ -0.74
PCP4P48539 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC10.41□□□□□ -0.74
PCP4P48539 SLCO2A1-201ENST00000310926 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC10.41□□□□□ -0.74
PCP4P48539 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PCP4P48539 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
PCP4P48539 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 ITGA4-203ENST00000397033 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 CHRNB1-202ENST00000536404 1623 ntTSL 2 BASIC10.4□□□□□ -0.74
PCP4P48539 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 GRID1-AS1-203ENST00000630182 2100 ntTSL 2 BASIC10.4□□□□□ -0.74
PCP4P48539 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC10.4□□□□□ -0.74
PCP4P48539 AFG3L1P-214ENST00000454997 3327 ntTSL 2 BASIC10.4□□□□□ -0.74
PCP4P48539 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC10.4□□□□□ -0.74
PCP4P48539 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 CHRNB1-208ENST00000576360 1837 ntTSL 3 BASIC10.4□□□□□ -0.74
PCP4P48539 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC10.4□□□□□ -0.74
PCP4P48539 KRT8P24-201ENST00000560290 1559 ntBASIC10.4□□□□□ -0.74
PCP4P48539 AL590440.2-201ENST00000641973 1595 ntBASIC10.4□□□□□ -0.74
PCP4P48539 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 SCN3B-206ENST00000530277 3984 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 DPP3-205ENST00000530165 2251 ntTSL 2 BASIC10.4□□□□□ -0.74
PCP4P48539 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC10.4□□□□□ -0.74
PCP4P48539 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
PCP4P48539 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms