RNA–Protein interactions for RNA: ENST00000391858.8

SPRTN-204, Transcript of SprT-like N-terminal domain, humanhuman

TSL 1 (best) BASIC

Gene SPRTN, Length 3,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRTN-204ENST00000391858 NISCHQ9Y2I1 1504 aa20.51■□□□□ 0.87
SPRTN-204ENST00000391858 HRCP23327 699 aa19.49■□□□□ 0.71
SPRTN-204ENST00000391858 PPARGC1BQ86YN6 1023 aaKnown RBP19.39■□□□□ 0.7
SPRTN-204ENST00000391858 PCGF6Q9BYE7 350 aa19.31■□□□□ 0.68
SPRTN-204ENST00000391858 SUPT5HO00267 1087 aaKnown RBP19.22■□□□□ 0.67
SPRTN-204ENST00000391858 SHROOM4Q9ULL8 1493 aa19.14■□□□□ 0.65
SPRTN-204ENST00000391858 PELP1Q8IZL8 1130 aaKnown RBP19.03■□□□□ 0.64
SPRTN-204ENST00000391858 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
SPRTN-204ENST00000391858 MYO15BQ96JP2 1530 aa18.65■□□□□ 0.58
SPRTN-204ENST00000391858 CHIC1Q5VXU3 224 aa18.61■□□□□ 0.57
SPRTN-204ENST00000391858 LOC105371045A0A1W2PR82 267 aa18.47■□□□□ 0.55
SPRTN-204ENST00000391858 TRIM26Q12899 539 aaPredicted RBP18.34■□□□□ 0.53
SPRTN-204ENST00000391858 MYT1Q01538 1121 aa18.29■□□□□ 0.52
SPRTN-204ENST00000391858 ZEB1P37275 1124 aaPredicted RBP18.19■□□□□ 0.5
SPRTN-204ENST00000391858 GTF3C3Q9Y5Q9 886 aa18.13■□□□□ 0.49
SPRTN-204ENST00000391858 NEUROD1Q13562 356 aa18.12■□□□□ 0.49
SPRTN-204ENST00000391858 DCAF8L2P0C7V8 631 aa18.11■□□□□ 0.49
SPRTN-204ENST00000391858 EHMT2Q96KQ7 1210 aa18.1■□□□□ 0.49
SPRTN-204ENST00000391858 ACIN1Q9UKV3 1341 aaKnown RBP18.1■□□□□ 0.49
SPRTN-204ENST00000391858 DCAF1Q9Y4B6 1507 aa18.09■□□□□ 0.49
SPRTN-204ENST00000391858 CENPBP07199 599 aaPredicted RBP17.94■□□□□ 0.46
SPRTN-204ENST00000391858 FAM9AQ8IZU1 332 aaPredicted RBP17.9■□□□□ 0.46
SPRTN-204ENST00000391858 YTHDC1Q96MU7 727 aaKnown RBP17.85■□□□□ 0.45
SPRTN-204ENST00000391858 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
SPRTN-204ENST00000391858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.81■□□□□ 0.44
SPRTN-204ENST00000391858 CCER1Q8TC90 406 aaPredicted RBP17.79■□□□□ 0.44
SPRTN-204ENST00000391858 DIEXFQ68CQ4 756 aaKnown RBP17.78■□□□□ 0.44
SPRTN-204ENST00000391858 TTBK1Q5TCY1 1321 aaPredicted RBP17.66■□□□□ 0.42
SPRTN-204ENST00000391858 TRIM41Q8WV44 630 aa17.57■□□□□ 0.4
SPRTN-204ENST00000391858 ZCCHC6Q5VYS8 1495 aaKnown RBP17.4■□□□□ 0.38
SPRTN-204ENST00000391858 BCL11AQ9H165 835 aa17.37■□□□□ 0.37
SPRTN-204ENST00000391858 MIER1Q8N108 512 aa17.3■□□□□ 0.36
SPRTN-204ENST00000391858 ZNF316A6NFI3 1004 aaPredicted RBP17.28■□□□□ 0.36
SPRTN-204ENST00000391858 ANP32EQ9BTT0 268 aa17.17■□□□□ 0.34
SPRTN-204ENST00000391858 CSRNP3Q8WYN3 585 aa17.1■□□□□ 0.33
SPRTN-204ENST00000391858 BCANQ96GW7 911 aa17.06■□□□□ 0.32
SPRTN-204ENST00000391858 SUPT16HQ9Y5B9 1047 aaKnown RBP17.06■□□□□ 0.32
SPRTN-204ENST00000391858 TSHZ2Q9NRE2 1034 aa17.03■□□□□ 0.32
SPRTN-204ENST00000391858 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
SPRTN-204ENST00000391858 UBTFP17480 764 aaKnown RBP16.78■□□□□ 0.28
SPRTN-204ENST00000391858 RSF1Q96T23 1441 aaPredicted RBP16.75■□□□□ 0.27
SPRTN-204ENST00000391858 FKBP8Q14318 412 aa16.74■□□□□ 0.27
SPRTN-204ENST00000391858 PRKCSHP14314 528 aaPredicted RBP16.74■□□□□ 0.27
SPRTN-204ENST00000391858 ITGAEP38570 1179 aa16.72■□□□□ 0.27
SPRTN-204ENST00000391858 RB1CC1Q8TDY2 1594 aa16.71■□□□□ 0.27
SPRTN-204ENST00000391858 CLSPNQ9HAW4 1339 aa16.7■□□□□ 0.26
SPRTN-204ENST00000391858 RANGAP1P46060 587 aaPredicted RBP16.69■□□□□ 0.26
SPRTN-204ENST00000391858 ERICH6Q7L0X2 663 aa16.69■□□□□ 0.26
SPRTN-204ENST00000391858 RBM19Q9Y4C8 960 aaKnown RBP16.67■□□□□ 0.26
SPRTN-204ENST00000391858 KCNH8Q96L42 1107 aa16.66■□□□□ 0.26
SPRTN-204ENST00000391858 NEFLP07196 543 aa16.62■□□□□ 0.25
SPRTN-204ENST00000391858 CEP162Q5TB80 1403 aa16.58■□□□□ 0.25
SPRTN-204ENST00000391858 APLP2Q06481 763 aa16.56■□□□□ 0.24
SPRTN-204ENST00000391858 ABCC9O60706 1549 aa16.55■□□□□ 0.24
SPRTN-204ENST00000391858 MSH5O43196 834 aa16.48■□□□□ 0.23
SPRTN-204ENST00000391858 TRIM52Q96A61 297 aa16.48■□□□□ 0.23
SPRTN-204ENST00000391858 WRNQ14191 1432 aaPredicted RBP eCLIP16.43■□□□□ 0.22
SPRTN-204ENST00000391858 SCRIBQ14160 1630 aa16.43■□□□□ 0.22
SPRTN-204ENST00000391858 IRX6P78412 446 aaPredicted RBP16.42■□□□□ 0.22
SPRTN-204ENST00000391858 DDX10Q13206 875 aaKnown RBP16.39■□□□□ 0.22
SPRTN-204ENST00000391858 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
SPRTN-204ENST00000391858 DEKP35659 375 aaKnown RBP16.37■□□□□ 0.21
SPRTN-204ENST00000391858 NBR1Q14596 966 aa16.35■□□□□ 0.21
SPRTN-204ENST00000391858 SOGA1O94964 1423 aa16.35■□□□□ 0.21
SPRTN-204ENST00000391858 TNIKQ9UKE5 1360 aa16.33■□□□□ 0.21
SPRTN-204ENST00000391858 HIRIP3Q9BW71 556 aaPredicted RBP16.33■□□□□ 0.2
SPRTN-204ENST00000391858 CDK11AQ9UQ88 783 aaPredicted RBP16.32■□□□□ 0.2
SPRTN-204ENST00000391858 CCDC88BA6NC98 1476 aa16.31■□□□□ 0.2
SPRTN-204ENST00000391858 CECR2Q9BXF3 1484 aa16.28■□□□□ 0.2
SPRTN-204ENST00000391858 ABCC8Q09428 1581 aa16.27■□□□□ 0.2
SPRTN-204ENST00000391858 CCDC136Q96JN2 1154 aa16.26■□□□□ 0.19
SPRTN-204ENST00000391858 RTN4Q9NQC3 1192 aaKnown RBP16.23■□□□□ 0.19
SPRTN-204ENST00000391858 RUSC2Q8N2Y8 1516 aa16.22■□□□□ 0.19
SPRTN-204ENST00000391858 DHX57Q6P158 1386 aaKnown RBP16.22■□□□□ 0.19
SPRTN-204ENST00000391858 SALL2Q9Y467 1007 aaPredicted RBP16.19■□□□□ 0.18
SPRTN-204ENST00000391858 MROH2BQ7Z745 1585 aa16.17■□□□□ 0.18
SPRTN-204ENST00000391858 ANP32CO43423 234 aa16.16■□□□□ 0.18
SPRTN-204ENST00000391858 FANCIQ9NVI1 1328 aa16.15■□□□□ 0.18
SPRTN-204ENST00000391858 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.15■□□□□ 0.18
SPRTN-204ENST00000391858 CLIP1P30622 1438 aa16.14■□□□□ 0.17
SPRTN-204ENST00000391858 HNRNPUQ00839 825 aaKnown RBP eCLIP16.12■□□□□ 0.17
SPRTN-204ENST00000391858 WIZO95785 1651 aa16.11■□□□□ 0.17
SPRTN-204ENST00000391858 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
SPRTN-204ENST00000391858 MYT1LQ9UL68 1186 aa16.09■□□□□ 0.17
SPRTN-204ENST00000391858 RTL5Q5HYW3 569 aaPredicted RBP16.08■□□□□ 0.17
SPRTN-204ENST00000391858 SIN3AQ96ST3 1273 aa16.07■□□□□ 0.16
SPRTN-204ENST00000391858 B4GALNT3Q6L9W6 998 aa16.06■□□□□ 0.16
SPRTN-204ENST00000391858 NOP58Q9Y2X3 529 aaKnown RBP16.04■□□□□ 0.16
SPRTN-204ENST00000391858 PAK3O75914 559 aaPredicted RBP16.03■□□□□ 0.16
SPRTN-204ENST00000391858 KANK4Q5T7N3 995 aaPredicted RBP16.03■□□□□ 0.16
SPRTN-204ENST00000391858 IL27Q8NEV9 243 aa16.03■□□□□ 0.16
SPRTN-204ENST00000391858 VPS8Q8N3P4 1428 aa16.01■□□□□ 0.15
SPRTN-204ENST00000391858 EIF5BO60841 1220 aaKnown RBP15.97■□□□□ 0.15
SPRTN-204ENST00000391858 EEA1Q15075 1411 aa15.95■□□□□ 0.14
SPRTN-204ENST00000391858 PPP1R15AO75807 674 aaPredicted RBP15.94■□□□□ 0.14
SPRTN-204ENST00000391858 CNGB1Q14028 1251 aaPredicted RBP15.94■□□□□ 0.14
SPRTN-204ENST00000391858 CCER2I3L3R5 266 aa15.92■□□□□ 0.14
SPRTN-204ENST00000391858 PPP4R2Q9NY27 417 aa15.92■□□□□ 0.14
SPRTN-204ENST00000391858 NPM2Q86SE8 214 aaKnown RBP15.91■□□□□ 0.14
SPRTN-204ENST00000391858 ANP32AP39687 249 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms