RNA–Protein interactions for RNA: ENST00000392547.6

WIPF1-204, Transcript of WAS/WASL interacting protein family member 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene WIPF1, Length 4,587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPF1-204ENST00000392547 NISCHQ9Y2I1 1504 aa23■■□□□ 1.27
WIPF1-204ENST00000392547 SHROOM4Q9ULL8 1493 aa20.4■□□□□ 0.86
WIPF1-204ENST00000392547 SUPT5HO00267 1087 aaKnown RBP20.15■□□□□ 0.82
WIPF1-204ENST00000392547 DCAF8L2P0C7V8 631 aa19.99■□□□□ 0.79
WIPF1-204ENST00000392547 ZCCHC6Q5VYS8 1495 aaKnown RBP19.4■□□□□ 0.7
WIPF1-204ENST00000392547 CHIC1Q5VXU3 224 aa19.29■□□□□ 0.68
WIPF1-204ENST00000392547 PELP1Q8IZL8 1130 aaKnown RBP19.23■□□□□ 0.67
WIPF1-204ENST00000392547 CCDC180Q9P1Z9 1646 aa19.2■□□□□ 0.66
WIPF1-204ENST00000392547 PCGF6Q9BYE7 350 aa19.14■□□□□ 0.65
WIPF1-204ENST00000392547 MYO15BQ96JP2 1530 aa19.11■□□□□ 0.65
WIPF1-204ENST00000392547 MYT1Q01538 1121 aa19.06■□□□□ 0.64
WIPF1-204ENST00000392547 LOC105371045A0A1W2PR82 267 aa18.96■□□□□ 0.63
WIPF1-204ENST00000392547 HRCP23327 699 aa18.95■□□□□ 0.62
WIPF1-204ENST00000392547 PPARGC1BQ86YN6 1023 aaKnown RBP18.79■□□□□ 0.6
WIPF1-204ENST00000392547 EHMT2Q96KQ7 1210 aa18.79■□□□□ 0.6
WIPF1-204ENST00000392547 FAM9AQ8IZU1 332 aaPredicted RBP18.72■□□□□ 0.59
WIPF1-204ENST00000392547 ZEB1P37275 1124 aaPredicted RBP18.67■□□□□ 0.58
WIPF1-204ENST00000392547 TRIM41Q8WV44 630 aa18.6■□□□□ 0.57
WIPF1-204ENST00000392547 DCAF1Q9Y4B6 1507 aa18.58■□□□□ 0.56
WIPF1-204ENST00000392547 TRIM26Q12899 539 aaPredicted RBP18.5■□□□□ 0.55
WIPF1-204ENST00000392547 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
WIPF1-204ENST00000392547 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
WIPF1-204ENST00000392547 CENPBP07199 599 aaPredicted RBP18.36■□□□□ 0.53
WIPF1-204ENST00000392547 ABCC9O60706 1549 aa18.33■□□□□ 0.52
WIPF1-204ENST00000392547 RB1CC1Q8TDY2 1594 aa18.19■□□□□ 0.5
WIPF1-204ENST00000392547 TTBK1Q5TCY1 1321 aaPredicted RBP18.18■□□□□ 0.5
WIPF1-204ENST00000392547 CECR2Q9BXF3 1484 aa18.12■□□□□ 0.49
WIPF1-204ENST00000392547 MROH2BQ7Z745 1585 aa17.99■□□□□ 0.47
WIPF1-204ENST00000392547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
WIPF1-204ENST00000392547 CCER1Q8TC90 406 aaPredicted RBP17.95■□□□□ 0.46
WIPF1-204ENST00000392547 NACADO15069 1562 aa17.9■□□□□ 0.46
WIPF1-204ENST00000392547 WIZO95785 1651 aa17.88■□□□□ 0.45
WIPF1-204ENST00000392547 UBTFP17480 764 aaKnown RBP17.83■□□□□ 0.44
WIPF1-204ENST00000392547 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
WIPF1-204ENST00000392547 RANGAP1P46060 587 aaPredicted RBP17.72■□□□□ 0.43
WIPF1-204ENST00000392547 APLP2Q06481 763 aa17.69■□□□□ 0.42
WIPF1-204ENST00000392547 ABCC8Q09428 1581 aa17.68■□□□□ 0.42
WIPF1-204ENST00000392547 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
WIPF1-204ENST00000392547 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
WIPF1-204ENST00000392547 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
WIPF1-204ENST00000392547 CSRNP3Q8WYN3 585 aa17.6■□□□□ 0.41
WIPF1-204ENST00000392547 SOGA1O94964 1423 aa17.58■□□□□ 0.41
WIPF1-204ENST00000392547 ERICH6Q7L0X2 663 aa17.57■□□□□ 0.4
WIPF1-204ENST00000392547 DIEXFQ68CQ4 756 aaKnown RBP17.56■□□□□ 0.4
WIPF1-204ENST00000392547 CEP162Q5TB80 1403 aa17.55■□□□□ 0.4
WIPF1-204ENST00000392547 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
WIPF1-204ENST00000392547 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
WIPF1-204ENST00000392547 RUSC2Q8N2Y8 1516 aa17.47■□□□□ 0.39
WIPF1-204ENST00000392547 SMARCA4P51532 1647 aa17.45■□□□□ 0.38
WIPF1-204ENST00000392547 YTHDC1Q96MU7 727 aaKnown RBP17.45■□□□□ 0.38
WIPF1-204ENST00000392547 NEFLP07196 543 aa17.43■□□□□ 0.38
WIPF1-204ENST00000392547 NEUROD1Q13562 356 aa17.43■□□□□ 0.38
WIPF1-204ENST00000392547 TNIKQ9UKE5 1360 aa17.41■□□□□ 0.38
WIPF1-204ENST00000392547 SMARCA2P51531 1590 aa17.41■□□□□ 0.38
WIPF1-204ENST00000392547 ACIN1Q9UKV3 1341 aaKnown RBP17.4■□□□□ 0.38
WIPF1-204ENST00000392547 EIF4G1Q04637 1599 aaKnown RBP17.35■□□□□ 0.37
WIPF1-204ENST00000392547 WRNQ14191 1432 aaPredicted RBP eCLIP17.35■□□□□ 0.37
WIPF1-204ENST00000392547 GTF3C3Q9Y5Q9 886 aa17.35■□□□□ 0.37
WIPF1-204ENST00000392547 GOLGA3Q08378 1498 aa17.32■□□□□ 0.36
WIPF1-204ENST00000392547 ZNF316A6NFI3 1004 aaPredicted RBP17.3■□□□□ 0.36
WIPF1-204ENST00000392547 EEA1Q15075 1411 aa17.3■□□□□ 0.36
WIPF1-204ENST00000392547 CLSPNQ9HAW4 1339 aa17.29■□□□□ 0.36
WIPF1-204ENST00000392547 CLIP1P30622 1438 aa17.24■□□□□ 0.35
WIPF1-204ENST00000392547 UNC13AQ9UPW8 1703 aa17.22■□□□□ 0.35
WIPF1-204ENST00000392547 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
WIPF1-204ENST00000392547 ITGAEP38570 1179 aa17.16■□□□□ 0.34
WIPF1-204ENST00000392547 BAZ1BQ9UIG0 1483 aaKnown RBP17.15■□□□□ 0.34
WIPF1-204ENST00000392547 MIER1Q8N108 512 aa17.14■□□□□ 0.33
WIPF1-204ENST00000392547 SYNJ1O43426 1573 aa17.1■□□□□ 0.33
WIPF1-204ENST00000392547 RAPGEF2Q9Y4G8 1499 aa17.1■□□□□ 0.33
WIPF1-204ENST00000392547 BICRAQ9NZM4 1560 aa17.08■□□□□ 0.32
WIPF1-204ENST00000392547 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
WIPF1-204ENST00000392547 VPS8Q8N3P4 1428 aa17.06■□□□□ 0.32
WIPF1-204ENST00000392547 ATP1B4Q9UN42 357 aaPredicted RBP17.02■□□□□ 0.32
WIPF1-204ENST00000392547 KANK4Q5T7N3 995 aaPredicted RBP16.98■□□□□ 0.31
WIPF1-204ENST00000392547 KIF21BO75037 1637 aa16.94■□□□□ 0.3
WIPF1-204ENST00000392547 MYT1LQ9UL68 1186 aa16.9■□□□□ 0.3
WIPF1-204ENST00000392547 PEG3Q9GZU2 1588 aa16.88■□□□□ 0.29
WIPF1-204ENST00000392547 P3H3Q8IVL6 736 aa16.87■□□□□ 0.29
WIPF1-204ENST00000392547 FAM50AQ14320 339 aaKnown RBP16.83■□□□□ 0.28
WIPF1-204ENST00000392547 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
WIPF1-204ENST00000392547 DHX57Q6P158 1386 aaKnown RBP16.79■□□□□ 0.28
WIPF1-204ENST00000392547 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
WIPF1-204ENST00000392547 ARAP1Q96P48 1450 aa16.75■□□□□ 0.27
WIPF1-204ENST00000392547 RTL5Q5HYW3 569 aaPredicted RBP16.74■□□□□ 0.27
WIPF1-204ENST00000392547 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
WIPF1-204ENST00000392547 CCNB3Q8WWL7 1395 aa16.72■□□□□ 0.27
WIPF1-204ENST00000392547 CUX1P39880 1505 aa16.7■□□□□ 0.26
WIPF1-204ENST00000392547 CUX2O14529 1486 aa16.69■□□□□ 0.26
WIPF1-204ENST00000392547 HIRIP3Q9BW71 556 aaPredicted RBP16.66■□□□□ 0.26
WIPF1-204ENST00000392547 ERICH3Q5RHP9 1530 aa16.66■□□□□ 0.26
WIPF1-204ENST00000392547 SIN3AQ96ST3 1273 aa16.65■□□□□ 0.26
WIPF1-204ENST00000392547 DAXXQ9UER7 740 aaPredicted RBP16.64■□□□□ 0.25
WIPF1-204ENST00000392547 DDX10Q13206 875 aaKnown RBP16.63■□□□□ 0.25
WIPF1-204ENST00000392547 NCAPD3P42695 1498 aa16.63■□□□□ 0.25
WIPF1-204ENST00000392547 CDK11AQ9UQ88 783 aaPredicted RBP16.63■□□□□ 0.25
WIPF1-204ENST00000392547 ARHGAP35Q9NRY4 1499 aa16.62■□□□□ 0.25
WIPF1-204ENST00000392547 RAB3GAP2Q9H2M9 1393 aa16.62■□□□□ 0.25
WIPF1-204ENST00000392547 CARMIL1Q5VZK9 1371 aa16.62■□□□□ 0.25
WIPF1-204ENST00000392547 BCANQ96GW7 911 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms