RNA–Protein interactions for RNA: ENST00000397033.6

ITGA4-203, Transcript of integrin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA4, Length 4,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-203ENST00000397033 NISCHQ9Y2I1 1504 aa22.99■■□□□ 1.27
ITGA4-203ENST00000397033 DCAF8L2P0C7V8 631 aa21.96■■□□□ 1.11
ITGA4-203ENST00000397033 SHROOM4Q9ULL8 1493 aa21.41■■□□□ 1.02
ITGA4-203ENST00000397033 SUPT5HO00267 1087 aaKnown RBP21.26■□□□□ 0.99
ITGA4-203ENST00000397033 EHMT2Q96KQ7 1210 aa20.39■□□□□ 0.86
ITGA4-203ENST00000397033 FAM9AQ8IZU1 332 aaPredicted RBP19.96■□□□□ 0.79
ITGA4-203ENST00000397033 PCGF6Q9BYE7 350 aa19.8■□□□□ 0.76
ITGA4-203ENST00000397033 TTBK1Q5TCY1 1321 aaPredicted RBP19.59■□□□□ 0.73
ITGA4-203ENST00000397033 LOC105371045A0A1W2PR82 267 aa19.53■□□□□ 0.72
ITGA4-203ENST00000397033 HRCP23327 699 aa19.53■□□□□ 0.72
ITGA4-203ENST00000397033 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.72
ITGA4-203ENST00000397033 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
ITGA4-203ENST00000397033 PPARGC1BQ86YN6 1023 aaKnown RBP19.45■□□□□ 0.7
ITGA4-203ENST00000397033 ABCC9O60706 1549 aa19.45■□□□□ 0.7
ITGA4-203ENST00000397033 CCDC180Q9P1Z9 1646 aa19.34■□□□□ 0.69
ITGA4-203ENST00000397033 RANGAP1P46060 587 aaPredicted RBP19.32■□□□□ 0.68
ITGA4-203ENST00000397033 ZCCHC6Q5VYS8 1495 aaKnown RBP19.17■□□□□ 0.66
ITGA4-203ENST00000397033 PABPN1Q86U42 306 aaKnown RBP eCLIP19.11■□□□□ 0.65
ITGA4-203ENST00000397033 PELP1Q8IZL8 1130 aaKnown RBP18.96■□□□□ 0.63
ITGA4-203ENST00000397033 UBTFP17480 764 aaKnown RBP18.96■□□□□ 0.63
ITGA4-203ENST00000397033 TRIM26Q12899 539 aaPredicted RBP18.81■□□□□ 0.6
ITGA4-203ENST00000397033 APLP2Q06481 763 aa18.78■□□□□ 0.6
ITGA4-203ENST00000397033 SCRIBQ14160 1630 aa18.77■□□□□ 0.6
ITGA4-203ENST00000397033 CCER1Q8TC90 406 aaPredicted RBP18.75■□□□□ 0.59
ITGA4-203ENST00000397033 ZEB1P37275 1124 aaPredicted RBP18.74■□□□□ 0.59
ITGA4-203ENST00000397033 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
ITGA4-203ENST00000397033 ATP1B4Q9UN42 357 aaPredicted RBP18.65■□□□□ 0.58
ITGA4-203ENST00000397033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
ITGA4-203ENST00000397033 CENPBP07199 599 aaPredicted RBP18.52■□□□□ 0.55
ITGA4-203ENST00000397033 DCAF1Q9Y4B6 1507 aa18.48■□□□□ 0.55
ITGA4-203ENST00000397033 HNRNPUL2Q1KMD3 747 aaKnown RBP18.48■□□□□ 0.55
ITGA4-203ENST00000397033 YTHDC1Q96MU7 727 aaKnown RBP18.46■□□□□ 0.55
ITGA4-203ENST00000397033 NACADO15069 1562 aa18.43■□□□□ 0.54
ITGA4-203ENST00000397033 ITGAEP38570 1179 aa18.43■□□□□ 0.54
ITGA4-203ENST00000397033 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
ITGA4-203ENST00000397033 SCAF1Q9H7N4 1312 aaKnown RBP18.41■□□□□ 0.54
ITGA4-203ENST00000397033 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
ITGA4-203ENST00000397033 CECR2Q9BXF3 1484 aa18.31■□□□□ 0.52
ITGA4-203ENST00000397033 GTF3C3Q9Y5Q9 886 aa18.29■□□□□ 0.52
ITGA4-203ENST00000397033 MYT1Q01538 1121 aa18.25■□□□□ 0.51
ITGA4-203ENST00000397033 DIEXFQ68CQ4 756 aaKnown RBP18.2■□□□□ 0.5
ITGA4-203ENST00000397033 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
ITGA4-203ENST00000397033 ACIN1Q9UKV3 1341 aaKnown RBP18.17■□□□□ 0.5
ITGA4-203ENST00000397033 NEUROD1Q13562 356 aa18.12■□□□□ 0.49
ITGA4-203ENST00000397033 P3H3Q8IVL6 736 aa18.06■□□□□ 0.48
ITGA4-203ENST00000397033 MROH2BQ7Z745 1585 aa18■□□□□ 0.47
ITGA4-203ENST00000397033 ARID3CA6NKF2 412 aa17.91■□□□□ 0.46
ITGA4-203ENST00000397033 FAM50AQ14320 339 aaKnown RBP17.88■□□□□ 0.45
ITGA4-203ENST00000397033 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
ITGA4-203ENST00000397033 CNGB1Q14028 1251 aaPredicted RBP17.82■□□□□ 0.44
ITGA4-203ENST00000397033 SOGA1O94964 1423 aa17.8■□□□□ 0.44
ITGA4-203ENST00000397033 WIZO95785 1651 aa17.77■□□□□ 0.43
ITGA4-203ENST00000397033 ABCC8Q09428 1581 aa17.76■□□□□ 0.43
ITGA4-203ENST00000397033 ZNF316A6NFI3 1004 aaPredicted RBP17.72■□□□□ 0.43
ITGA4-203ENST00000397033 CCDC88BA6NC98 1476 aa17.7■□□□□ 0.42
ITGA4-203ENST00000397033 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
ITGA4-203ENST00000397033 FBLN2P98095 1184 aa17.69■□□□□ 0.42
ITGA4-203ENST00000397033 CEP162Q5TB80 1403 aa17.68■□□□□ 0.42
ITGA4-203ENST00000397033 WRNQ14191 1432 aaPredicted RBP eCLIP17.67■□□□□ 0.42
ITGA4-203ENST00000397033 POLR3GLQ9BT43 218 aa17.64■□□□□ 0.41
ITGA4-203ENST00000397033 CLIP1P30622 1438 aa17.58■□□□□ 0.41
ITGA4-203ENST00000397033 MIER1Q8N108 512 aa17.57■□□□□ 0.4
ITGA4-203ENST00000397033 BCANQ96GW7 911 aa17.57■□□□□ 0.4
ITGA4-203ENST00000397033 RUSC2Q8N2Y8 1516 aa17.55■□□□□ 0.4
ITGA4-203ENST00000397033 TRIM52Q96A61 297 aa17.53■□□□□ 0.4
ITGA4-203ENST00000397033 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
ITGA4-203ENST00000397033 ERICH6Q7L0X2 663 aa17.5■□□□□ 0.39
ITGA4-203ENST00000397033 HIRIP3Q9BW71 556 aaPredicted RBP17.47■□□□□ 0.39
ITGA4-203ENST00000397033 NEFLP07196 543 aa17.47■□□□□ 0.39
ITGA4-203ENST00000397033 TNIKQ9UKE5 1360 aa17.45■□□□□ 0.38
ITGA4-203ENST00000397033 GOLGA3Q08378 1498 aa17.44■□□□□ 0.38
ITGA4-203ENST00000397033 ATAD2BQ9ULI0 1458 aa17.43■□□□□ 0.38
ITGA4-203ENST00000397033 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
ITGA4-203ENST00000397033 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
ITGA4-203ENST00000397033 CHIC2Q9UKJ5 165 aa17.42■□□□□ 0.38
ITGA4-203ENST00000397033 MYT1LQ9UL68 1186 aa17.39■□□□□ 0.37
ITGA4-203ENST00000397033 ZNF326Q5BKZ1 582 aaKnown RBP17.39■□□□□ 0.37
ITGA4-203ENST00000397033 KANK4Q5T7N3 995 aaPredicted RBP17.38■□□□□ 0.37
ITGA4-203ENST00000397033 ZNF777Q9ULD5 760 aaPredicted RBP17.36■□□□□ 0.37
ITGA4-203ENST00000397033 EEA1Q15075 1411 aa17.3■□□□□ 0.36
ITGA4-203ENST00000397033 CEP164Q9UPV0 1460 aa17.29■□□□□ 0.36
ITGA4-203ENST00000397033 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
ITGA4-203ENST00000397033 DDX10Q13206 875 aaKnown RBP17.27■□□□□ 0.36
ITGA4-203ENST00000397033 KIF27Q86VH2 1401 aa17.25■□□□□ 0.35
ITGA4-203ENST00000397033 RAPGEF2Q9Y4G8 1499 aa17.22■□□□□ 0.35
ITGA4-203ENST00000397033 SIN3AQ96ST3 1273 aa17.22■□□□□ 0.35
ITGA4-203ENST00000397033 RRP7BPQ9NSQ0 103 aa17.21■□□□□ 0.35
ITGA4-203ENST00000397033 CUX2O14529 1486 aa17.21■□□□□ 0.35
ITGA4-203ENST00000397033 EIF4G1Q04637 1599 aaKnown RBP17.19■□□□□ 0.34
ITGA4-203ENST00000397033 FKBP8Q14318 412 aa17.18■□□□□ 0.34
ITGA4-203ENST00000397033 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
ITGA4-203ENST00000397033 UNC13AQ9UPW8 1703 aa17.14■□□□□ 0.33
ITGA4-203ENST00000397033 CARMIL1Q5VZK9 1371 aa17.14■□□□□ 0.33
ITGA4-203ENST00000397033 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.33
ITGA4-203ENST00000397033 SUPT16HQ9Y5B9 1047 aaKnown RBP17.14■□□□□ 0.33
ITGA4-203ENST00000397033 CADPSQ9ULU8 1353 aa17.12■□□□□ 0.33
ITGA4-203ENST00000397033 SENP3-EIF4A1A0A087X0R7 540 aa17.11■□□□□ 0.33
ITGA4-203ENST00000397033 NCAPD3P42695 1498 aa17.11■□□□□ 0.33
ITGA4-203ENST00000397033 ANP32EQ9BTT0 268 aa17.1■□□□□ 0.33
ITGA4-203ENST00000397033 VPS8Q8N3P4 1428 aa17.1■□□□□ 0.33
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