RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 NISCHQ9Y2I1 1504 aa27.31■■□□□ 1.96
SLC48A1-201ENST00000442218 CCDC180Q9P1Z9 1646 aa23.57■■□□□ 1.36
SLC48A1-201ENST00000442218 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
SLC48A1-201ENST00000442218 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
SLC48A1-201ENST00000442218 ZCCHC6Q5VYS8 1495 aaKnown RBP22.96■■□□□ 1.27
SLC48A1-201ENST00000442218 DCAF8L2P0C7V8 631 aa22.96■■□□□ 1.27
SLC48A1-201ENST00000442218 DCAF1Q9Y4B6 1507 aa22.43■■□□□ 1.18
SLC48A1-201ENST00000442218 ABCC9O60706 1549 aa22.4■■□□□ 1.18
SLC48A1-201ENST00000442218 MYO15BQ96JP2 1530 aa22.05■■□□□ 1.12
SLC48A1-201ENST00000442218 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
SLC48A1-201ENST00000442218 NACADO15069 1562 aa21.95■■□□□ 1.1
SLC48A1-201ENST00000442218 SCRIBQ14160 1630 aa21.94■■□□□ 1.1
SLC48A1-201ENST00000442218 PCGF6Q9BYE7 350 aa21.93■■□□□ 1.1
SLC48A1-201ENST00000442218 LOC105371045A0A1W2PR82 267 aa21.77■■□□□ 1.08
SLC48A1-201ENST00000442218 PPARGC1BQ86YN6 1023 aaKnown RBP21.75■■□□□ 1.07
SLC48A1-201ENST00000442218 RB1CC1Q8TDY2 1594 aa21.74■■□□□ 1.07
SLC48A1-201ENST00000442218 HRCP23327 699 aa21.7■■□□□ 1.06
SLC48A1-201ENST00000442218 EHMT2Q96KQ7 1210 aa21.56■■□□□ 1.04
SLC48A1-201ENST00000442218 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
SLC48A1-201ENST00000442218 FAM9AQ8IZU1 332 aaPredicted RBP21.38■■□□□ 1.01
SLC48A1-201ENST00000442218 CECR2Q9BXF3 1484 aa21.34■■□□□ 1.01
SLC48A1-201ENST00000442218 RSF1Q96T23 1441 aaPredicted RBP21.33■■□□□ 1
SLC48A1-201ENST00000442218 PABPN1Q86U42 306 aaKnown RBP eCLIP21.27■■□□□ 1
SLC48A1-201ENST00000442218 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
SLC48A1-201ENST00000442218 BICRAQ9NZM4 1560 aa21.18■□□□□ 0.98
SLC48A1-201ENST00000442218 TRIM41Q8WV44 630 aa21.08■□□□□ 0.96
SLC48A1-201ENST00000442218 WIZO95785 1651 aa21.04■□□□□ 0.96
SLC48A1-201ENST00000442218 TRIM26Q12899 539 aaPredicted RBP21.03■□□□□ 0.96
SLC48A1-201ENST00000442218 BAZ1AQ9NRL2 1556 aaPredicted RBP21.02■□□□□ 0.96
SLC48A1-201ENST00000442218 SMARCA4P51532 1647 aa20.95■□□□□ 0.94
SLC48A1-201ENST00000442218 TTBK1Q5TCY1 1321 aaPredicted RBP20.84■□□□□ 0.93
SLC48A1-201ENST00000442218 TOP2AP11388 1531 aaKnown RBP20.7■□□□□ 0.9
SLC48A1-201ENST00000442218 CCDC88BA6NC98 1476 aa20.6■□□□□ 0.89
SLC48A1-201ENST00000442218 PEG3Q9GZU2 1588 aa20.59■□□□□ 0.89
SLC48A1-201ENST00000442218 ATAD2BQ9ULI0 1458 aa20.58■□□□□ 0.89
SLC48A1-201ENST00000442218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.58■□□□□ 0.89
SLC48A1-201ENST00000442218 SMARCA2P51531 1590 aa20.57■□□□□ 0.88
SLC48A1-201ENST00000442218 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
SLC48A1-201ENST00000442218 BAZ1BQ9UIG0 1483 aaKnown RBP20.47■□□□□ 0.87
SLC48A1-201ENST00000442218 ZEB1P37275 1124 aaPredicted RBP20.43■□□□□ 0.86
SLC48A1-201ENST00000442218 ABCC8Q09428 1581 aa20.41■□□□□ 0.86
SLC48A1-201ENST00000442218 CCER1Q8TC90 406 aaPredicted RBP20.4■□□□□ 0.86
SLC48A1-201ENST00000442218 SCAF1Q9H7N4 1312 aaKnown RBP20.35■□□□□ 0.85
SLC48A1-201ENST00000442218 NCAPD3P42695 1498 aa20.31■□□□□ 0.84
SLC48A1-201ENST00000442218 RANGAP1P46060 587 aaPredicted RBP20.26■□□□□ 0.83
SLC48A1-201ENST00000442218 HMGXB3Q12766 1538 aa20.25■□□□□ 0.83
SLC48A1-201ENST00000442218 SOGA1O94964 1423 aa20.24■□□□□ 0.83
SLC48A1-201ENST00000442218 RUSC2Q8N2Y8 1516 aa20.2■□□□□ 0.82
SLC48A1-201ENST00000442218 CC2D2AQ9P2K1 1620 aa20.19■□□□□ 0.82
SLC48A1-201ENST00000442218 UBTFP17480 764 aaKnown RBP20.18■□□□□ 0.82
SLC48A1-201ENST00000442218 NEUROD1Q13562 356 aa20.07■□□□□ 0.8
SLC48A1-201ENST00000442218 WRNQ14191 1432 aaPredicted RBP eCLIP20.04■□□□□ 0.8
SLC48A1-201ENST00000442218 DIEXFQ68CQ4 756 aaKnown RBP20.02■□□□□ 0.8
SLC48A1-201ENST00000442218 CSRNP3Q8WYN3 585 aa20.02■□□□□ 0.79
SLC48A1-201ENST00000442218 HNRNPUL2Q1KMD3 747 aaKnown RBP20■□□□□ 0.79
SLC48A1-201ENST00000442218 YTHDC1Q96MU7 727 aaKnown RBP20■□□□□ 0.79
SLC48A1-201ENST00000442218 SYNJ1O43426 1573 aa19.99■□□□□ 0.79
SLC48A1-201ENST00000442218 CEP162Q5TB80 1403 aa19.96■□□□□ 0.79
SLC48A1-201ENST00000442218 CFTRP13569 1480 aa19.94■□□□□ 0.78
SLC48A1-201ENST00000442218 ACIN1Q9UKV3 1341 aaKnown RBP19.91■□□□□ 0.78
SLC48A1-201ENST00000442218 GTF3C3Q9Y5Q9 886 aa19.91■□□□□ 0.78
SLC48A1-201ENST00000442218 DNAJC5BQ9UF47 199 aa19.89■□□□□ 0.77
SLC48A1-201ENST00000442218 CADPSQ9ULU8 1353 aa19.86■□□□□ 0.77
SLC48A1-201ENST00000442218 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
SLC48A1-201ENST00000442218 CUX1P39880 1505 aa19.78■□□□□ 0.76
SLC48A1-201ENST00000442218 TNIKQ9UKE5 1360 aa19.76■□□□□ 0.75
SLC48A1-201ENST00000442218 PRDM2Q13029 1718 aa19.75■□□□□ 0.75
SLC48A1-201ENST00000442218 NESP48681 1621 aa19.75■□□□□ 0.75
SLC48A1-201ENST00000442218 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
SLC48A1-201ENST00000442218 EEA1Q15075 1411 aa19.73■□□□□ 0.75
SLC48A1-201ENST00000442218 CENPBP07199 599 aaPredicted RBP19.7■□□□□ 0.74
SLC48A1-201ENST00000442218 ZNF316A6NFI3 1004 aaPredicted RBP19.68■□□□□ 0.74
SLC48A1-201ENST00000442218 FANCD2Q9BXW9 1451 aa19.66■□□□□ 0.74
SLC48A1-201ENST00000442218 MIER1Q8N108 512 aa19.65■□□□□ 0.74
SLC48A1-201ENST00000442218 GOLGA3Q08378 1498 aa19.65■□□□□ 0.74
SLC48A1-201ENST00000442218 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
SLC48A1-201ENST00000442218 APLP2Q06481 763 aa19.64■□□□□ 0.73
SLC48A1-201ENST00000442218 PELP1Q8IZL8 1130 aaKnown RBP19.61■□□□□ 0.73
SLC48A1-201ENST00000442218 CLIP1P30622 1438 aa19.6■□□□□ 0.73
SLC48A1-201ENST00000442218 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
SLC48A1-201ENST00000442218 ITGAEP38570 1179 aa19.54■□□□□ 0.72
SLC48A1-201ENST00000442218 CEP164Q9UPV0 1460 aa19.53■□□□□ 0.72
SLC48A1-201ENST00000442218 FGD5Q6ZNL6 1462 aa19.53■□□□□ 0.72
SLC48A1-201ENST00000442218 KIF21BO75037 1637 aa19.51■□□□□ 0.71
SLC48A1-201ENST00000442218 KIF27Q86VH2 1401 aa19.49■□□□□ 0.71
SLC48A1-201ENST00000442218 KANK4Q5T7N3 995 aaPredicted RBP19.47■□□□□ 0.71
SLC48A1-201ENST00000442218 CUX2O14529 1486 aa19.46■□□□□ 0.71
SLC48A1-201ENST00000442218 TOPBP1Q92547 1522 aa19.46■□□□□ 0.71
SLC48A1-201ENST00000442218 DNMBPQ6XZF7 1577 aa19.45■□□□□ 0.7
SLC48A1-201ENST00000442218 PDS5BQ9NTI5 1447 aa19.44■□□□□ 0.7
SLC48A1-201ENST00000442218 URB2Q14146 1524 aaKnown RBP19.43■□□□□ 0.7
SLC48A1-201ENST00000442218 RAD54L2Q9Y4B4 1467 aa19.42■□□□□ 0.7
SLC48A1-201ENST00000442218 KIF21AQ7Z4S6 1674 aa19.42■□□□□ 0.7
SLC48A1-201ENST00000442218 PRXQ9BXM0 1461 aa19.42■□□□□ 0.7
SLC48A1-201ENST00000442218 POLA1P09884 1462 aaPredicted RBP19.4■□□□□ 0.7
SLC48A1-201ENST00000442218 VPS8Q8N3P4 1428 aa19.38■□□□□ 0.69
SLC48A1-201ENST00000442218 P3H3Q8IVL6 736 aa19.37■□□□□ 0.69
SLC48A1-201ENST00000442218 IGF1RP08069 1367 aa19.36■□□□□ 0.69
SLC48A1-201ENST00000442218 ATP1B4Q9UN42 357 aaPredicted RBP19.33■□□□□ 0.68
SLC48A1-201ENST00000442218 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms