RNA–Protein interactions for RNA: ENST00000639409.1

PAX6-257, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-257ENST00000639409 NISCHQ9Y2I1 1504 aa23.87■■□□□ 1.41
PAX6-257ENST00000639409 CCDC180Q9P1Z9 1646 aa20.55■□□□□ 0.88
PAX6-257ENST00000639409 ZCCHC6Q5VYS8 1495 aaKnown RBP20.15■□□□□ 0.82
PAX6-257ENST00000639409 SHROOM4Q9ULL8 1493 aa19.98■□□□□ 0.79
PAX6-257ENST00000639409 DCAF8L2P0C7V8 631 aa19.73■□□□□ 0.75
PAX6-257ENST00000639409 DCAF1Q9Y4B6 1507 aa19.62■□□□□ 0.73
PAX6-257ENST00000639409 SUPT5HO00267 1087 aaKnown RBP19.37■□□□□ 0.69
PAX6-257ENST00000639409 ABCC9O60706 1549 aa19.26■□□□□ 0.67
PAX6-257ENST00000639409 MYO15BQ96JP2 1530 aa19.2■□□□□ 0.66
PAX6-257ENST00000639409 SCRIBQ14160 1630 aa19.14■□□□□ 0.65
PAX6-257ENST00000639409 NACADO15069 1562 aa19.03■□□□□ 0.64
PAX6-257ENST00000639409 RB1CC1Q8TDY2 1594 aa18.8■□□□□ 0.6
PAX6-257ENST00000639409 RSF1Q96T23 1441 aaPredicted RBP18.72■□□□□ 0.59
PAX6-257ENST00000639409 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
PAX6-257ENST00000639409 CECR2Q9BXF3 1484 aa18.63■□□□□ 0.57
PAX6-257ENST00000639409 UNC13AQ9UPW8 1703 aa18.61■□□□□ 0.57
PAX6-257ENST00000639409 MROH2BQ7Z745 1585 aa18.55■□□□□ 0.56
PAX6-257ENST00000639409 MYT1Q01538 1121 aa18.45■□□□□ 0.54
PAX6-257ENST00000639409 WIZO95785 1651 aa18.45■□□□□ 0.54
PAX6-257ENST00000639409 SLC24A1O60721 1099 aa18.4■□□□□ 0.54
PAX6-257ENST00000639409 BAZ1AQ9NRL2 1556 aaPredicted RBP18.37■□□□□ 0.53
PAX6-257ENST00000639409 PELP1Q8IZL8 1130 aaKnown RBP18.36■□□□□ 0.53
PAX6-257ENST00000639409 BICRAQ9NZM4 1560 aa18.35■□□□□ 0.53
PAX6-257ENST00000639409 SMARCA4P51532 1647 aa18.29■□□□□ 0.52
PAX6-257ENST00000639409 PABPN1Q86U42 306 aaKnown RBP eCLIP18.27■□□□□ 0.52
PAX6-257ENST00000639409 TOP2AP11388 1531 aaKnown RBP18.15■□□□□ 0.5
PAX6-257ENST00000639409 EIF4G1Q04637 1599 aaKnown RBP18.09■□□□□ 0.49
PAX6-257ENST00000639409 LOC105371045A0A1W2PR82 267 aa18.09■□□□□ 0.49
PAX6-257ENST00000639409 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.49
PAX6-257ENST00000639409 TRIM41Q8WV44 630 aa18.08■□□□□ 0.48
PAX6-257ENST00000639409 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
PAX6-257ENST00000639409 CCDC88BA6NC98 1476 aa18.02■□□□□ 0.47
PAX6-257ENST00000639409 PEG3Q9GZU2 1588 aa17.98■□□□□ 0.47
PAX6-257ENST00000639409 FAM9AQ8IZU1 332 aaPredicted RBP17.9■□□□□ 0.46
PAX6-257ENST00000639409 ABCC8Q09428 1581 aa17.88■□□□□ 0.45
PAX6-257ENST00000639409 ATAD2BQ9ULI0 1458 aa17.87■□□□□ 0.45
PAX6-257ENST00000639409 BAZ1BQ9UIG0 1483 aaKnown RBP17.8■□□□□ 0.44
PAX6-257ENST00000639409 EHMT2Q96KQ7 1210 aa17.75■□□□□ 0.43
PAX6-257ENST00000639409 PCGF6Q9BYE7 350 aa17.67■□□□□ 0.42
PAX6-257ENST00000639409 HMGXB3Q12766 1538 aa17.61■□□□□ 0.41
PAX6-257ENST00000639409 SOGA1O94964 1423 aa17.59■□□□□ 0.41
PAX6-257ENST00000639409 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
PAX6-257ENST00000639409 WRNQ14191 1432 aaPredicted RBP eCLIP17.59■□□□□ 0.41
PAX6-257ENST00000639409 SYNJ1O43426 1573 aa17.58■□□□□ 0.4
PAX6-257ENST00000639409 RUSC2Q8N2Y8 1516 aa17.55■□□□□ 0.4
PAX6-257ENST00000639409 PRKCSHP14314 528 aaPredicted RBP17.44■□□□□ 0.38
PAX6-257ENST00000639409 TRIM26Q12899 539 aaPredicted RBP17.43■□□□□ 0.38
PAX6-257ENST00000639409 EEA1Q15075 1411 aa17.42■□□□□ 0.38
PAX6-257ENST00000639409 HRCP23327 699 aa17.42■□□□□ 0.38
PAX6-257ENST00000639409 TOP2BQ02880 1626 aa17.39■□□□□ 0.37
PAX6-257ENST00000639409 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.37
PAX6-257ENST00000639409 CSRNP3Q8WYN3 585 aa17.39■□□□□ 0.37
PAX6-257ENST00000639409 APLP2Q06481 763 aa17.37■□□□□ 0.37
PAX6-257ENST00000639409 ERICH6Q7L0X2 663 aa17.37■□□□□ 0.37
PAX6-257ENST00000639409 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
PAX6-257ENST00000639409 CFTRP13569 1480 aa17.35■□□□□ 0.37
PAX6-257ENST00000639409 CEP162Q5TB80 1403 aa17.33■□□□□ 0.36
PAX6-257ENST00000639409 TNIKQ9UKE5 1360 aa17.31■□□□□ 0.36
PAX6-257ENST00000639409 GOLGA3Q08378 1498 aa17.3■□□□□ 0.36
PAX6-257ENST00000639409 CUX1P39880 1505 aa17.3■□□□□ 0.36
PAX6-257ENST00000639409 PRDM2Q13029 1718 aa17.29■□□□□ 0.36
PAX6-257ENST00000639409 DAXXQ9UER7 740 aaPredicted RBP17.29■□□□□ 0.36
PAX6-257ENST00000639409 PPARGC1BQ86YN6 1023 aaKnown RBP17.28■□□□□ 0.36
PAX6-257ENST00000639409 KIF21BO75037 1637 aa17.28■□□□□ 0.36
PAX6-257ENST00000639409 UBTFP17480 764 aaKnown RBP17.26■□□□□ 0.35
PAX6-257ENST00000639409 CEP164Q9UPV0 1460 aa17.25■□□□□ 0.35
PAX6-257ENST00000639409 RAPGEF2Q9Y4G8 1499 aa17.2■□□□□ 0.34
PAX6-257ENST00000639409 CADPSQ9ULU8 1353 aa17.2■□□□□ 0.34
PAX6-257ENST00000639409 PRXQ9BXM0 1461 aa17.08■□□□□ 0.33
PAX6-257ENST00000639409 NESP48681 1621 aa17.07■□□□□ 0.32
PAX6-257ENST00000639409 CLIP1P30622 1438 aa17.07■□□□□ 0.32
PAX6-257ENST00000639409 KIF27Q86VH2 1401 aa17.06■□□□□ 0.32
PAX6-257ENST00000639409 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
PAX6-257ENST00000639409 FANCD2Q9BXW9 1451 aa17.06■□□□□ 0.32
PAX6-257ENST00000639409 FGD5Q6ZNL6 1462 aa17.03■□□□□ 0.32
PAX6-257ENST00000639409 RANGAP1P46060 587 aaPredicted RBP17.01■□□□□ 0.31
PAX6-257ENST00000639409 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
PAX6-257ENST00000639409 CUX2O14529 1486 aa16.99■□□□□ 0.31
PAX6-257ENST00000639409 VPS8Q8N3P4 1428 aa16.97■□□□□ 0.31
PAX6-257ENST00000639409 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
PAX6-257ENST00000639409 LAMC3Q9Y6N6 1575 aa16.93■□□□□ 0.3
PAX6-257ENST00000639409 TOPBP1Q92547 1522 aa16.92■□□□□ 0.3
PAX6-257ENST00000639409 IGF1RP08069 1367 aa16.91■□□□□ 0.3
PAX6-257ENST00000639409 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
PAX6-257ENST00000639409 POLA1P09884 1462 aaPredicted RBP16.89■□□□□ 0.29
PAX6-257ENST00000639409 RAD54L2Q9Y4B4 1467 aa16.89■□□□□ 0.29
PAX6-257ENST00000639409 URB2Q14146 1524 aaKnown RBP16.85■□□□□ 0.29
PAX6-257ENST00000639409 KIF21AQ7Z4S6 1674 aa16.83■□□□□ 0.29
PAX6-257ENST00000639409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.83■□□□□ 0.28
PAX6-257ENST00000639409 ABCA10Q8WWZ4 1543 aa16.83■□□□□ 0.28
PAX6-257ENST00000639409 ZEB1P37275 1124 aaPredicted RBP16.82■□□□□ 0.28
PAX6-257ENST00000639409 CARMIL1Q5VZK9 1371 aa16.81■□□□□ 0.28
PAX6-257ENST00000639409 ARHGAP35Q9NRY4 1499 aa16.81■□□□□ 0.28
PAX6-257ENST00000639409 WDR97A6NE52 1622 aa16.79■□□□□ 0.28
PAX6-257ENST00000639409 PDS5BQ9NTI5 1447 aa16.77■□□□□ 0.27
PAX6-257ENST00000639409 CCER1Q8TC90 406 aaPredicted RBP16.72■□□□□ 0.27
PAX6-257ENST00000639409 ABCA5Q8WWZ7 1642 aa16.7■□□□□ 0.26
PAX6-257ENST00000639409 CUL7Q14999 1698 aa16.7■□□□□ 0.26
PAX6-257ENST00000639409 KANK4Q5T7N3 995 aaPredicted RBP16.69■□□□□ 0.26
PAX6-257ENST00000639409 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 407.6 ms