RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 NISCHQ9Y2I1 1504 aa26.4■■□□□ 1.82
CDKL1-201ENST00000216378 CCDC180Q9P1Z9 1646 aa23.18■■□□□ 1.3
CDKL1-201ENST00000216378 ABCC9O60706 1549 aa22.78■■□□□ 1.24
CDKL1-201ENST00000216378 DCAF8L2P0C7V8 631 aa22.18■■□□□ 1.14
CDKL1-201ENST00000216378 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
CDKL1-201ENST00000216378 NACADO15069 1562 aa21.77■■□□□ 1.08
CDKL1-201ENST00000216378 RB1CC1Q8TDY2 1594 aa21.76■■□□□ 1.07
CDKL1-201ENST00000216378 DCAF1Q9Y4B6 1507 aa21.68■■□□□ 1.06
CDKL1-201ENST00000216378 MYO15BQ96JP2 1530 aa21.64■■□□□ 1.05
CDKL1-201ENST00000216378 SCRIBQ14160 1630 aa21.44■■□□□ 1.02
CDKL1-201ENST00000216378 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
CDKL1-201ENST00000216378 UNC13AQ9UPW8 1703 aa21.42■■□□□ 1.02
CDKL1-201ENST00000216378 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
CDKL1-201ENST00000216378 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
CDKL1-201ENST00000216378 DNAJC5BQ9UF47 199 aa20.88■□□□□ 0.93
CDKL1-201ENST00000216378 CECR2Q9BXF3 1484 aa20.72■□□□□ 0.91
CDKL1-201ENST00000216378 EIF4G1Q04637 1599 aaKnown RBP20.64■□□□□ 0.9
CDKL1-201ENST00000216378 CC2D2AQ9P2K1 1620 aa20.52■□□□□ 0.88
CDKL1-201ENST00000216378 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
CDKL1-201ENST00000216378 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
CDKL1-201ENST00000216378 BAZ1AQ9NRL2 1556 aaPredicted RBP20.36■□□□□ 0.85
CDKL1-201ENST00000216378 ATAD2BQ9ULI0 1458 aa20.29■□□□□ 0.84
CDKL1-201ENST00000216378 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
CDKL1-201ENST00000216378 WIZO95785 1651 aa20.25■□□□□ 0.83
CDKL1-201ENST00000216378 NCAPD3P42695 1498 aa20.17■□□□□ 0.82
CDKL1-201ENST00000216378 PEG3Q9GZU2 1588 aa20.14■□□□□ 0.81
CDKL1-201ENST00000216378 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
CDKL1-201ENST00000216378 SUPT5HO00267 1087 aaKnown RBP20.1■□□□□ 0.81
CDKL1-201ENST00000216378 BAZ1BQ9UIG0 1483 aaKnown RBP20.09■□□□□ 0.81
CDKL1-201ENST00000216378 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
CDKL1-201ENST00000216378 TOP2AP11388 1531 aaKnown RBP19.9■□□□□ 0.78
CDKL1-201ENST00000216378 NESP48681 1621 aa19.84■□□□□ 0.77
CDKL1-201ENST00000216378 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
CDKL1-201ENST00000216378 CADPSQ9ULU8 1353 aa19.63■□□□□ 0.73
CDKL1-201ENST00000216378 CFTRP13569 1480 aa19.57■□□□□ 0.72
CDKL1-201ENST00000216378 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
CDKL1-201ENST00000216378 ERCC6Q03468 1493 aa19.48■□□□□ 0.71
CDKL1-201ENST00000216378 KIF21AQ7Z4S6 1674 aa19.48■□□□□ 0.71
CDKL1-201ENST00000216378 FANCD2Q9BXW9 1451 aa19.43■□□□□ 0.7
CDKL1-201ENST00000216378 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
CDKL1-201ENST00000216378 CEP164Q9UPV0 1460 aa19.33■□□□□ 0.68
CDKL1-201ENST00000216378 THOC2Q8NI27 1593 aaKnown RBP19.32■□□□□ 0.68
CDKL1-201ENST00000216378 PRDM2Q13029 1718 aa19.29■□□□□ 0.68
CDKL1-201ENST00000216378 URB2Q14146 1524 aaKnown RBP19.29■□□□□ 0.68
CDKL1-201ENST00000216378 MRC2Q9UBG0 1479 aa19.24■□□□□ 0.67
CDKL1-201ENST00000216378 ABCC8Q09428 1581 aa19.23■□□□□ 0.67
CDKL1-201ENST00000216378 WDR62O43379 1518 aa19.18■□□□□ 0.66
CDKL1-201ENST00000216378 CUX1P39880 1505 aa19.15■□□□□ 0.66
CDKL1-201ENST00000216378 TOPBP1Q92547 1522 aa19.15■□□□□ 0.66
CDKL1-201ENST00000216378 CUX2O14529 1486 aa19.09■□□□□ 0.65
CDKL1-201ENST00000216378 SYNJ1O43426 1573 aa19.08■□□□□ 0.64
CDKL1-201ENST00000216378 DNMBPQ6XZF7 1577 aa19.07■□□□□ 0.64
CDKL1-201ENST00000216378 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
CDKL1-201ENST00000216378 RAD54L2Q9Y4B4 1467 aa19.05■□□□□ 0.64
CDKL1-201ENST00000216378 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
CDKL1-201ENST00000216378 FGD5Q6ZNL6 1462 aa19.02■□□□□ 0.64
CDKL1-201ENST00000216378 ZNF608Q9ULD9 1512 aaPredicted RBP19■□□□□ 0.63
CDKL1-201ENST00000216378 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
CDKL1-201ENST00000216378 TOP2BQ02880 1626 aa18.94■□□□□ 0.62
CDKL1-201ENST00000216378 SOGA1O94964 1423 aa18.93■□□□□ 0.62
CDKL1-201ENST00000216378 TARBP1Q13395 1621 aaKnown RBP18.92■□□□□ 0.62
CDKL1-201ENST00000216378 TDRD9Q8NDG6 1382 aaKnown RBP18.92■□□□□ 0.62
CDKL1-201ENST00000216378 BIVM-ERCC5R4GMW8 1640 aa18.91■□□□□ 0.62
CDKL1-201ENST00000216378 AQRO60306 1485 aaKnown RBP eCLIP18.91■□□□□ 0.62
CDKL1-201ENST00000216378 IFT140Q96RY7 1462 aa18.88■□□□□ 0.61
CDKL1-201ENST00000216378 PELP1Q8IZL8 1130 aaKnown RBP18.87■□□□□ 0.61
CDKL1-201ENST00000216378 TRIM41Q8WV44 630 aa18.83■□□□□ 0.6
CDKL1-201ENST00000216378 EIF4G3O43432 1585 aaKnown RBP18.8■□□□□ 0.6
CDKL1-201ENST00000216378 WDR97A6NE52 1622 aa18.77■□□□□ 0.6
CDKL1-201ENST00000216378 ABCA10Q8WWZ4 1543 aa18.77■□□□□ 0.6
CDKL1-201ENST00000216378 RUSC2Q8N2Y8 1516 aa18.76■□□□□ 0.59
CDKL1-201ENST00000216378 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
CDKL1-201ENST00000216378 ABCA5Q8WWZ7 1642 aa18.69■□□□□ 0.58
CDKL1-201ENST00000216378 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
CDKL1-201ENST00000216378 FBLN2P98095 1184 aa18.64■□□□□ 0.57
CDKL1-201ENST00000216378 FAM9AQ8IZU1 332 aaPredicted RBP18.63■□□□□ 0.57
CDKL1-201ENST00000216378 GRIN2BQ13224 1484 aa18.61■□□□□ 0.57
CDKL1-201ENST00000216378 PBRM1Q86U86 1689 aa18.6■□□□□ 0.57
CDKL1-201ENST00000216378 IGF1RP08069 1367 aa18.59■□□□□ 0.57
CDKL1-201ENST00000216378 KIF27Q86VH2 1401 aa18.58■□□□□ 0.56
CDKL1-201ENST00000216378 MYT1Q01538 1121 aa18.54■□□□□ 0.56
CDKL1-201ENST00000216378 LOC105371045A0A1W2PR82 267 aa18.53■□□□□ 0.56
CDKL1-201ENST00000216378 CHD1O14646 1710 aa18.52■□□□□ 0.55
CDKL1-201ENST00000216378 CHMP7Q8WUX9 453 aaPredicted RBP18.51■□□□□ 0.55
CDKL1-201ENST00000216378 EHMT2Q96KQ7 1210 aa18.51■□□□□ 0.55
CDKL1-201ENST00000216378 MAGI1Q96QZ7 1491 aaPredicted RBP18.5■□□□□ 0.55
CDKL1-201ENST00000216378 ERICH3Q5RHP9 1530 aa18.49■□□□□ 0.55
CDKL1-201ENST00000216378 ADAMTS12P58397 1594 aa18.49■□□□□ 0.55
CDKL1-201ENST00000216378 SYNJ2O15056 1496 aa18.48■□□□□ 0.55
CDKL1-201ENST00000216378 OSCARQ8IYS5 282 aa18.45■□□□□ 0.54
CDKL1-201ENST00000216378 FHAD1B1AJZ9 1412 aa18.44■□□□□ 0.54
CDKL1-201ENST00000216378 CARMIL1Q5VZK9 1371 aa18.44■□□□□ 0.54
CDKL1-201ENST00000216378 GRIN2AQ12879 1464 aa18.42■□□□□ 0.54
CDKL1-201ENST00000216378 CSRNP3Q8WYN3 585 aa18.41■□□□□ 0.54
CDKL1-201ENST00000216378 DNAJC5Q9H3Z4 198 aa18.38■□□□□ 0.53
CDKL1-201ENST00000216378 CEP170Q5SW79 1584 aa18.38■□□□□ 0.53
CDKL1-201ENST00000216378 PRXQ9BXM0 1461 aa18.35■□□□□ 0.53
CDKL1-201ENST00000216378 RAPGEF2Q9Y4G8 1499 aa18.34■□□□□ 0.53
CDKL1-201ENST00000216378 CUL7Q14999 1698 aa18.33■□□□□ 0.53
CDKL1-201ENST00000216378 NUP160Q12769 1436 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms