RNA–Protein interactions for RNA: ENST00000231173.5

PCDHB15-201, Transcript of protocadherin beta 15, humanhuman

APPRIS P1 BASIC

Gene PCDHB15, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB15-201ENST00000231173 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
PCDHB15-201ENST00000231173 DCAF8L2P0C7V8 631 aa21.88■■□□□ 1.09
PCDHB15-201ENST00000231173 SHROOM4Q9ULL8 1493 aa21.34■■□□□ 1.01
PCDHB15-201ENST00000231173 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
PCDHB15-201ENST00000231173 EHMT2Q96KQ7 1210 aa20.19■□□□□ 0.82
PCDHB15-201ENST00000231173 PCGF6Q9BYE7 350 aa20.12■□□□□ 0.81
PCDHB15-201ENST00000231173 FAM9AQ8IZU1 332 aaPredicted RBP19.84■□□□□ 0.77
PCDHB15-201ENST00000231173 HRCP23327 699 aa19.68■□□□□ 0.74
PCDHB15-201ENST00000231173 PPARGC1BQ86YN6 1023 aaKnown RBP19.53■□□□□ 0.72
PCDHB15-201ENST00000231173 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
PCDHB15-201ENST00000231173 TRIM41Q8WV44 630 aa19.45■□□□□ 0.7
PCDHB15-201ENST00000231173 ABCC9O60706 1549 aa19.44■□□□□ 0.7
PCDHB15-201ENST00000231173 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
PCDHB15-201ENST00000231173 TTBK1Q5TCY1 1321 aaPredicted RBP19.4■□□□□ 0.7
PCDHB15-201ENST00000231173 ZCCHC6Q5VYS8 1495 aaKnown RBP19.29■□□□□ 0.68
PCDHB15-201ENST00000231173 TRIM26Q12899 539 aaPredicted RBP19.18■□□□□ 0.66
PCDHB15-201ENST00000231173 RANGAP1P46060 587 aaPredicted RBP19.17■□□□□ 0.66
PCDHB15-201ENST00000231173 ZEB1P37275 1124 aaPredicted RBP19.17■□□□□ 0.66
PCDHB15-201ENST00000231173 PABPN1Q86U42 306 aaKnown RBP eCLIP19.11■□□□□ 0.65
PCDHB15-201ENST00000231173 CCER1Q8TC90 406 aaPredicted RBP19.05■□□□□ 0.64
PCDHB15-201ENST00000231173 PELP1Q8IZL8 1130 aaKnown RBP19.03■□□□□ 0.64
PCDHB15-201ENST00000231173 CCDC180Q9P1Z9 1646 aa19.02■□□□□ 0.63
PCDHB15-201ENST00000231173 UBTFP17480 764 aaKnown RBP18.92■□□□□ 0.62
PCDHB15-201ENST00000231173 CENPBP07199 599 aaPredicted RBP18.9■□□□□ 0.62
PCDHB15-201ENST00000231173 SCRIBQ14160 1630 aa18.9■□□□□ 0.62
PCDHB15-201ENST00000231173 YTHDC1Q96MU7 727 aaKnown RBP18.8■□□□□ 0.6
PCDHB15-201ENST00000231173 APLP2Q06481 763 aa18.75■□□□□ 0.59
PCDHB15-201ENST00000231173 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
PCDHB15-201ENST00000231173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
PCDHB15-201ENST00000231173 ATP1B4Q9UN42 357 aaPredicted RBP18.55■□□□□ 0.56
PCDHB15-201ENST00000231173 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
PCDHB15-201ENST00000231173 DIEXFQ68CQ4 756 aaKnown RBP18.5■□□□□ 0.55
PCDHB15-201ENST00000231173 GTF3C3Q9Y5Q9 886 aa18.43■□□□□ 0.54
PCDHB15-201ENST00000231173 DCAF1Q9Y4B6 1507 aa18.41■□□□□ 0.54
PCDHB15-201ENST00000231173 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
PCDHB15-201ENST00000231173 HNRNPUL2Q1KMD3 747 aaKnown RBP18.38■□□□□ 0.53
PCDHB15-201ENST00000231173 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
PCDHB15-201ENST00000231173 MYT1Q01538 1121 aa18.34■□□□□ 0.53
PCDHB15-201ENST00000231173 ITGAEP38570 1179 aa18.32■□□□□ 0.52
PCDHB15-201ENST00000231173 ACIN1Q9UKV3 1341 aaKnown RBP18.31■□□□□ 0.52
PCDHB15-201ENST00000231173 CSRNP3Q8WYN3 585 aa18.21■□□□□ 0.51
PCDHB15-201ENST00000231173 NEUROD1Q13562 356 aa18.2■□□□□ 0.5
PCDHB15-201ENST00000231173 NACADO15069 1562 aa18.17■□□□□ 0.5
PCDHB15-201ENST00000231173 RB1CC1Q8TDY2 1594 aa18.15■□□□□ 0.5
PCDHB15-201ENST00000231173 MROH2BQ7Z745 1585 aa18.12■□□□□ 0.49
PCDHB15-201ENST00000231173 ZNF316A6NFI3 1004 aaPredicted RBP18.06■□□□□ 0.48
PCDHB15-201ENST00000231173 P3H3Q8IVL6 736 aa18■□□□□ 0.47
PCDHB15-201ENST00000231173 NEFLP07196 543 aa17.98■□□□□ 0.47
PCDHB15-201ENST00000231173 ERICH6Q7L0X2 663 aa17.94■□□□□ 0.46
PCDHB15-201ENST00000231173 WIZO95785 1651 aa17.91■□□□□ 0.46
PCDHB15-201ENST00000231173 BAZ1AQ9NRL2 1556 aaPredicted RBP17.87■□□□□ 0.45
PCDHB15-201ENST00000231173 BCANQ96GW7 911 aa17.85■□□□□ 0.45
PCDHB15-201ENST00000231173 FAM50AQ14320 339 aaKnown RBP17.83■□□□□ 0.45
PCDHB15-201ENST00000231173 ABCC8Q09428 1581 aa17.83■□□□□ 0.45
PCDHB15-201ENST00000231173 SOGA1O94964 1423 aa17.83■□□□□ 0.44
PCDHB15-201ENST00000231173 ARID3CA6NKF2 412 aa17.81■□□□□ 0.44
PCDHB15-201ENST00000231173 CCDC88BA6NC98 1476 aa17.8■□□□□ 0.44
PCDHB15-201ENST00000231173 MIER1Q8N108 512 aa17.79■□□□□ 0.44
PCDHB15-201ENST00000231173 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
PCDHB15-201ENST00000231173 BAZ1BQ9UIG0 1483 aaKnown RBP17.74■□□□□ 0.43
PCDHB15-201ENST00000231173 CEP162Q5TB80 1403 aa17.73■□□□□ 0.43
PCDHB15-201ENST00000231173 FBLN2P98095 1184 aa17.66■□□□□ 0.42
PCDHB15-201ENST00000231173 CLIP1P30622 1438 aa17.63■□□□□ 0.41
PCDHB15-201ENST00000231173 CNGB1Q14028 1251 aaPredicted RBP17.63■□□□□ 0.41
PCDHB15-201ENST00000231173 RUSC2Q8N2Y8 1516 aa17.59■□□□□ 0.41
PCDHB15-201ENST00000231173 TNIKQ9UKE5 1360 aa17.54■□□□□ 0.4
PCDHB15-201ENST00000231173 GOLGA3Q08378 1498 aa17.54■□□□□ 0.4
PCDHB15-201ENST00000231173 TOP2AP11388 1531 aaKnown RBP17.51■□□□□ 0.39
PCDHB15-201ENST00000231173 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
PCDHB15-201ENST00000231173 POLR3GLQ9BT43 218 aa17.5■□□□□ 0.39
PCDHB15-201ENST00000231173 TRIM52Q96A61 297 aa17.48■□□□□ 0.39
PCDHB15-201ENST00000231173 FKBP8Q14318 412 aa17.47■□□□□ 0.39
PCDHB15-201ENST00000231173 EEA1Q15075 1411 aa17.46■□□□□ 0.39
PCDHB15-201ENST00000231173 ATAD2BQ9ULI0 1458 aa17.44■□□□□ 0.38
PCDHB15-201ENST00000231173 DDX10Q13206 875 aaKnown RBP17.42■□□□□ 0.38
PCDHB15-201ENST00000231173 ANP32CO43423 234 aa17.41■□□□□ 0.38
PCDHB15-201ENST00000231173 CEP164Q9UPV0 1460 aa17.4■□□□□ 0.38
PCDHB15-201ENST00000231173 KANK4Q5T7N3 995 aaPredicted RBP17.36■□□□□ 0.37
PCDHB15-201ENST00000231173 CHIC2Q9UKJ5 165 aa17.36■□□□□ 0.37
PCDHB15-201ENST00000231173 KIF27Q86VH2 1401 aa17.35■□□□□ 0.37
PCDHB15-201ENST00000231173 SMARCA2P51531 1590 aa17.35■□□□□ 0.37
PCDHB15-201ENST00000231173 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
PCDHB15-201ENST00000231173 MYT1LQ9UL68 1186 aa17.33■□□□□ 0.36
PCDHB15-201ENST00000231173 ZNF777Q9ULD5 760 aaPredicted RBP17.32■□□□□ 0.36
PCDHB15-201ENST00000231173 CLSPNQ9HAW4 1339 aa17.3■□□□□ 0.36
PCDHB15-201ENST00000231173 CUX2O14529 1486 aa17.29■□□□□ 0.36
PCDHB15-201ENST00000231173 ZNF326Q5BKZ1 582 aaKnown RBP17.29■□□□□ 0.36
PCDHB15-201ENST00000231173 RAPGEF2Q9Y4G8 1499 aa17.28■□□□□ 0.36
PCDHB15-201ENST00000231173 CDK11AQ9UQ88 783 aaPredicted RBP17.28■□□□□ 0.36
PCDHB15-201ENST00000231173 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.35
PCDHB15-201ENST00000231173 CARMIL1Q5VZK9 1371 aa17.22■□□□□ 0.35
PCDHB15-201ENST00000231173 MTUS2Q5JR59 1369 aa17.18■□□□□ 0.34
PCDHB15-201ENST00000231173 IRX6P78412 446 aaPredicted RBP17.18■□□□□ 0.34
PCDHB15-201ENST00000231173 HNRNPUQ00839 825 aaKnown RBP eCLIP17.18■□□□□ 0.34
PCDHB15-201ENST00000231173 VPS8Q8N3P4 1428 aa17.18■□□□□ 0.34
PCDHB15-201ENST00000231173 TDRD9Q8NDG6 1382 aaKnown RBP17.18■□□□□ 0.34
PCDHB15-201ENST00000231173 RRP7BPQ9NSQ0 103 aa17.18■□□□□ 0.34
PCDHB15-201ENST00000231173 SIN3AQ96ST3 1273 aa17.16■□□□□ 0.34
PCDHB15-201ENST00000231173 ANP32EQ9BTT0 268 aa17.15■□□□□ 0.34
PCDHB15-201ENST00000231173 CADPSQ9ULU8 1353 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms