RNA–Protein interactions for RNA: ENST00000467908.1

PDXK-209, Transcript of pyridoxal kinase, humanhuman

TSL 3 BASIC

Gene PDXK, Length 7,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXK-209ENST00000467908 NISCHQ9Y2I1 1504 aa21.32■■□□□ 1
PDXK-209ENST00000467908 DCAF8L2P0C7V8 631 aa20.21■□□□□ 0.83
PDXK-209ENST00000467908 SHROOM4Q9ULL8 1493 aa19.07■□□□□ 0.64
PDXK-209ENST00000467908 SUPT5HO00267 1087 aaKnown RBP18.7■□□□□ 0.58
PDXK-209ENST00000467908 EHMT2Q96KQ7 1210 aa18.63■□□□□ 0.57
PDXK-209ENST00000467908 ABCC9O60706 1549 aa18.52■□□□□ 0.56
PDXK-209ENST00000467908 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
PDXK-209ENST00000467908 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
PDXK-209ENST00000467908 PABPN1Q86U42 306 aaKnown RBP eCLIP17.95■□□□□ 0.461e-5■□□□□ 8.6
PDXK-209ENST00000467908 MYT1Q01538 1121 aa17.87■□□□□ 0.45
PDXK-209ENST00000467908 TTBK1Q5TCY1 1321 aaPredicted RBP17.83■□□□□ 0.44
PDXK-209ENST00000467908 RANGAP1P46060 587 aaPredicted RBP17.74■□□□□ 0.43
PDXK-209ENST00000467908 ERICH6Q7L0X2 663 aa17.67■□□□□ 0.42
PDXK-209ENST00000467908 ZCCHC6Q5VYS8 1495 aaKnown RBP17.67■□□□□ 0.42
PDXK-209ENST00000467908 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
PDXK-209ENST00000467908 ATP1B4Q9UN42 357 aaPredicted RBP17.56■□□□□ 0.4
PDXK-209ENST00000467908 FAM9AQ8IZU1 332 aaPredicted RBP17.53■□□□□ 0.4
PDXK-209ENST00000467908 CHIC1Q5VXU3 224 aa17.48■□□□□ 0.39
PDXK-209ENST00000467908 RB1CC1Q8TDY2 1594 aa17.47■□□□□ 0.39
PDXK-209ENST00000467908 TRIM41Q8WV44 630 aa17.37■□□□□ 0.37
PDXK-209ENST00000467908 APLP2Q06481 763 aa17.37■□□□□ 0.37
PDXK-209ENST00000467908 NACADO15069 1562 aa17.34■□□□□ 0.37
PDXK-209ENST00000467908 CCER1Q8TC90 406 aaPredicted RBP17.29■□□□□ 0.36
PDXK-209ENST00000467908 MYT1LQ9UL68 1186 aa17.26■□□□□ 0.35
PDXK-209ENST00000467908 CENPBP07199 599 aaPredicted RBP17.14■□□□□ 0.33
PDXK-209ENST00000467908 CNGB1Q14028 1251 aaPredicted RBP17.09■□□□□ 0.33
PDXK-209ENST00000467908 DCAF1Q9Y4B6 1507 aa17.03■□□□□ 0.32
PDXK-209ENST00000467908 UBTFP17480 764 aaKnown RBP17.02■□□□□ 0.31
PDXK-209ENST00000467908 POLR3GLQ9BT43 218 aa17■□□□□ 0.31
PDXK-209ENST00000467908 SLC4A1APQ9BWU0 796 aaKnown RBP17■□□□□ 0.31
PDXK-209ENST00000467908 PCGF6Q9BYE7 350 aa16.87■□□□□ 0.29
PDXK-209ENST00000467908 YTHDC1Q96MU7 727 aaKnown RBP16.85■□□□□ 0.29
PDXK-209ENST00000467908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.81■□□□□ 0.28
PDXK-209ENST00000467908 HNRNPUL2Q1KMD3 747 aaKnown RBP16.81■□□□□ 0.28
PDXK-209ENST00000467908 BCL11AQ9H165 835 aa16.79■□□□□ 0.28
PDXK-209ENST00000467908 CECR2Q9BXF3 1484 aa16.75■□□□□ 0.27
PDXK-209ENST00000467908 DAXXQ9UER7 740 aaPredicted RBP16.75■□□□□ 0.27
PDXK-209ENST00000467908 LOC105371045A0A1W2PR82 267 aa16.73■□□□□ 0.27
PDXK-209ENST00000467908 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
PDXK-209ENST00000467908 MYO15BQ96JP2 1530 aa16.72■□□□□ 0.27
PDXK-209ENST00000467908 RSF1Q96T23 1441 aaPredicted RBP16.71■□□□□ 0.27
PDXK-209ENST00000467908 PPARGC1BQ86YN6 1023 aaKnown RBP16.7■□□□□ 0.26
PDXK-209ENST00000467908 NEFLP07196 543 aa16.68■□□□□ 0.26
PDXK-209ENST00000467908 BAZ1BQ9UIG0 1483 aaKnown RBP16.66■□□□□ 0.26
PDXK-209ENST00000467908 BAZ1AQ9NRL2 1556 aaPredicted RBP16.65■□□□□ 0.26
PDXK-209ENST00000467908 FBLN2P98095 1184 aa16.63■□□□□ 0.25
PDXK-209ENST00000467908 ITGAEP38570 1179 aa16.56■□□□□ 0.24
PDXK-209ENST00000467908 MROH2BQ7Z745 1585 aa16.55■□□□□ 0.24
PDXK-209ENST00000467908 PLPPR3Q6T4P5 718 aa16.53■□□□□ 0.24
PDXK-209ENST00000467908 WIZO95785 1651 aa16.49■□□□□ 0.23
PDXK-209ENST00000467908 ZEB1P37275 1124 aaPredicted RBP16.45■□□□□ 0.22
PDXK-209ENST00000467908 CLSPNQ9HAW4 1339 aa16.4■□□□□ 0.22
PDXK-209ENST00000467908 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
PDXK-209ENST00000467908 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
PDXK-209ENST00000467908 ERCC6Q03468 1493 aa16.37■□□□□ 0.21
PDXK-209ENST00000467908 RTL5Q5HYW3 569 aaPredicted RBP16.34■□□□□ 0.21
PDXK-209ENST00000467908 UNC13AQ9UPW8 1703 aa16.32■□□□□ 0.2
PDXK-209ENST00000467908 BCANQ96GW7 911 aa16.31■□□□□ 0.2
PDXK-209ENST00000467908 P3H3Q8IVL6 736 aa16.31■□□□□ 0.2
PDXK-209ENST00000467908 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
PDXK-209ENST00000467908 ZNF316A6NFI3 1004 aaPredicted RBP16.3■□□□□ 0.2
PDXK-209ENST00000467908 CCDC88BA6NC98 1476 aa16.28■□□□□ 0.2
PDXK-209ENST00000467908 ATAD2BQ9ULI0 1458 aa16.26■□□□□ 0.19
PDXK-209ENST00000467908 EIF4G1Q04637 1599 aaKnown RBP16.24■□□□□ 0.19
PDXK-209ENST00000467908 ARID3CA6NKF2 412 aa16.23■□□□□ 0.19
PDXK-209ENST00000467908 TOP2AP11388 1531 aaKnown RBP16.2■□□□□ 0.18
PDXK-209ENST00000467908 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
PDXK-209ENST00000467908 A0A0G2JS52 829 aa16.16■□□□□ 0.18
PDXK-209ENST00000467908 BICRAQ9NZM4 1560 aa16.16■□□□□ 0.18
PDXK-209ENST00000467908 CHMP7Q8WUX9 453 aaPredicted RBP16.15■□□□□ 0.18
PDXK-209ENST00000467908 EIF5BO60841 1220 aaKnown RBP16.12■□□□□ 0.17
PDXK-209ENST00000467908 CC2D2AQ9P2K1 1620 aa16.12■□□□□ 0.17
PDXK-209ENST00000467908 ABCC8Q09428 1581 aa16.11■□□□□ 0.17
PDXK-209ENST00000467908 TULP1O00294 542 aaPredicted RBP16.07■□□□□ 0.16
PDXK-209ENST00000467908 PDS5BQ9NTI5 1447 aa16.07■□□□□ 0.16
PDXK-209ENST00000467908 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
PDXK-209ENST00000467908 PLEKHG5O94827 1062 aa16.04■□□□□ 0.16
PDXK-209ENST00000467908 TRIM26Q12899 539 aaPredicted RBP16.04■□□□□ 0.16
PDXK-209ENST00000467908 FAM50AQ14320 339 aaKnown RBP16.04■□□□□ 0.16
PDXK-209ENST00000467908 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
PDXK-209ENST00000467908 ZBTB47Q9UFB7 747 aaPredicted RBP16.02■□□□□ 0.15
PDXK-209ENST00000467908 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
PDXK-209ENST00000467908 HRCP23327 699 aa15.98■□□□□ 0.15
PDXK-209ENST00000467908 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
PDXK-209ENST00000467908 KIF27Q86VH2 1401 aa15.96■□□□□ 0.15
PDXK-209ENST00000467908 NCAPD3P42695 1498 aa15.95■□□□□ 0.14
PDXK-209ENST00000467908 GLIPR1L2Q4G1C9 344 aa15.94■□□□□ 0.14
PDXK-209ENST00000467908 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
PDXK-209ENST00000467908 CUX2O14529 1486 aa15.93■□□□□ 0.14
PDXK-209ENST00000467908 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
PDXK-209ENST00000467908 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
PDXK-209ENST00000467908 SOGA1O94964 1423 aa15.89■□□□□ 0.13
PDXK-209ENST00000467908 ZNF326Q5BKZ1 582 aaKnown RBP15.88■□□□□ 0.13
PDXK-209ENST00000467908 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
PDXK-209ENST00000467908 ZNF777Q9ULD5 760 aaPredicted RBP15.86■□□□□ 0.13
PDXK-209ENST00000467908 NPM1P06748 294 aaKnown RBP eCLIP15.85■□□□□ 0.13
PDXK-209ENST00000467908 NESP48681 1621 aa15.85■□□□□ 0.13
PDXK-209ENST00000467908 TRIM52Q96A61 297 aa15.84■□□□□ 0.13
PDXK-209ENST00000467908 EEA1Q15075 1411 aa15.82■□□□□ 0.12
PDXK-209ENST00000467908 GOLGA3Q08378 1498 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms