Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RFC1P35251 AL138828.2-201ENST00000615812 383 ntBASIC16.61■□□□□ 0.25
RFC1P35251 SPDYE12P-201ENST00000618416 771 ntBASIC16.61■□□□□ 0.25
RFC1P35251 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.61■□□□□ 0.25
RFC1P35251 TMBIM7P-203ENST00000641617 1718 ntBASIC16.61■□□□□ 0.25
RFC1P35251 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
RFC1P35251 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RFC1P35251 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RFC1P35251 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.6■□□□□ 0.25
RFC1P35251 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RFC1P35251 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RFC1P35251 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.6■□□□□ 0.25
RFC1P35251 TARDBPP1-201ENST00000442013 1203 ntBASIC16.6■□□□□ 0.25
RFC1P35251 HLA-V-204ENST00000476601 1289 ntBASIC16.6■□□□□ 0.25
RFC1P35251 AC125807.1-201ENST00000483097 614 ntBASIC16.6■□□□□ 0.25
RFC1P35251 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.6■□□□□ 0.25
RFC1P35251 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.6■□□□□ 0.25
RFC1P35251 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.6■□□□□ 0.25
RFC1P35251 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.6■□□□□ 0.25
RFC1P35251 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.6■□□□□ 0.25
RFC1P35251 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RFC1P35251 FO538757.1-201ENST00000623083 1397 ntBASIC16.6■□□□□ 0.25
RFC1P35251 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RFC1P35251 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RFC1P35251 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFC1P35251 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RFC1P35251 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC1P35251 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
RFC1P35251 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RFC1P35251 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RFC1P35251 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.59■□□□□ 0.25
RFC1P35251 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RFC1P35251 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RFC1P35251 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.59■□□□□ 0.25
RFC1P35251 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC1P35251 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC1P35251 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RFC1P35251 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC1P35251 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.59■□□□□ 0.25
RFC1P35251 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 TEX28P1-201ENST00000613479 1221 ntBASIC16.59■□□□□ 0.25
RFC1P35251 TEX28P2-201ENST00000617764 1221 ntBASIC16.59■□□□□ 0.25
RFC1P35251 MIR6069-201ENST00000620069 79 ntBASIC16.59■□□□□ 0.25
RFC1P35251 AL033527.5-202ENST00000641632 1098 ntBASIC16.59■□□□□ 0.25
RFC1P35251 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC1P35251 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RFC1P35251 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC1P35251 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RFC1P35251 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.59■□□□□ 0.25
RFC1P35251 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms