Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 SLC25A39P2-201ENST00000537614 270 ntBASIC16.21■□□□□ 0.19
CCDC97Q96F63 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.21■□□□□ 0.19
CCDC97Q96F63 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC97Q96F63 AP000842.3-202ENST00000569238 1080 ntBASIC16.21■□□□□ 0.19
CCDC97Q96F63 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC97Q96F63 AC008267.7-201ENST00000624570 1194 ntBASIC16.21■□□□□ 0.19
CCDC97Q96F63 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC97Q96F63 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCDC97Q96F63 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CCDC97Q96F63 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC97Q96F63 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC97Q96F63 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC97Q96F63 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC97Q96F63 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC97Q96F63 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC97Q96F63 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC97Q96F63 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC97Q96F63 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.21■□□□□ 0.18
CCDC97Q96F63 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.21■□□□□ 0.18
CCDC97Q96F63 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CCDC97Q96F63 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.21■□□□□ 0.18
CCDC97Q96F63 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC97Q96F63 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC97Q96F63 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 KRT18P32-201ENST00000424695 1287 ntBASIC16.2■□□□□ 0.18
CCDC97Q96F63 AC055876.3-201ENST00000431496 288 ntBASIC16.2■□□□□ 0.18
CCDC97Q96F63 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 DUX4L27-201ENST00000554796 1261 ntBASIC16.2■□□□□ 0.18
CCDC97Q96F63 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 AC138649.4-201ENST00000612222 287 ntBASIC16.2■□□□□ 0.18
CCDC97Q96F63 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC97Q96F63 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC97Q96F63 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC97Q96F63 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.19■□□□□ 0.18
CCDC97Q96F63 AL589702.1-201ENST00000641229 1509 ntBASIC16.19■□□□□ 0.18
CCDC97Q96F63 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC97Q96F63 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC97Q96F63 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
CCDC97Q96F63 AC026691.1-201ENST00000602502 2017 ntBASIC16.19■□□□□ 0.18
CCDC97Q96F63 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC97Q96F63 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC97Q96F63 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC97Q96F63 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC97Q96F63 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC97Q96F63 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC97Q96F63 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC97Q96F63 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC97Q96F63 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC97Q96F63 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC97Q96F63 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC97Q96F63 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC97Q96F63 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC97Q96F63 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC97Q96F63 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC97Q96F63 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC97Q96F63 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.19■□□□□ 0.18
CCDC97Q96F63 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CCDC97Q96F63 GPS2P2-201ENST00000430745 888 ntBASIC16.19■□□□□ 0.18
CCDC97Q96F63 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCDC97Q96F63 POU5F1P6-201ENST00000466990 990 ntBASIC16.19■□□□□ 0.18
CCDC97Q96F63 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms