Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 KRT18P60-201ENST00000312876 1297 ntBASIC21.63■■□□□ 1.05
SLC38A1Q9H2H9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.63■■□□□ 1.05
SLC38A1Q9H2H9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC38A1Q9H2H9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC38A1Q9H2H9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SLC38A1Q9H2H9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC38A1Q9H2H9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC38A1Q9H2H9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC38A1Q9H2H9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC38A1Q9H2H9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC38A1Q9H2H9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC38A1Q9H2H9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC38A1Q9H2H9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC38A1Q9H2H9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC38A1Q9H2H9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC38A1Q9H2H9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC38A1Q9H2H9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC38A1Q9H2H9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC38A1Q9H2H9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC38A1Q9H2H9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC38A1Q9H2H9 AC004812.2-201ENST00000611079 2094 ntBASIC21.6■■□□□ 1.05
SLC38A1Q9H2H9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC38A1Q9H2H9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC38A1Q9H2H9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC38A1Q9H2H9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC38A1Q9H2H9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SLC38A1Q9H2H9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC38A1Q9H2H9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC38A1Q9H2H9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC38A1Q9H2H9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SLC38A1Q9H2H9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC38A1Q9H2H9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
SLC38A1Q9H2H9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC38A1Q9H2H9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
SLC38A1Q9H2H9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC38A1Q9H2H9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC38A1Q9H2H9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC38A1Q9H2H9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
SLC38A1Q9H2H9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.59■■□□□ 1.05
SLC38A1Q9H2H9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC38A1Q9H2H9 ABHD17AP5-201ENST00000580133 923 ntBASIC21.59■■□□□ 1.05
SLC38A1Q9H2H9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC38A1Q9H2H9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC38A1Q9H2H9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.58■■□□□ 1.05
SLC38A1Q9H2H9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC38A1Q9H2H9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC38A1Q9H2H9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC38A1Q9H2H9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.58■■□□□ 1.05
SLC38A1Q9H2H9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC38A1Q9H2H9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLC38A1Q9H2H9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLC38A1Q9H2H9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC38A1Q9H2H9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC38A1Q9H2H9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC38A1Q9H2H9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC38A1Q9H2H9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC38A1Q9H2H9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC38A1Q9H2H9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC38A1Q9H2H9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLC38A1Q9H2H9 LONRF2P2-201ENST00000439212 571 ntBASIC21.56■■□□□ 1.04
SLC38A1Q9H2H9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.56■■□□□ 1.04
SLC38A1Q9H2H9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.56■■□□□ 1.04
SLC38A1Q9H2H9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC38A1Q9H2H9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC38A1Q9H2H9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC38A1Q9H2H9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.55■■□□□ 1.04
SLC38A1Q9H2H9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.55■■□□□ 1.04
SLC38A1Q9H2H9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC38A1Q9H2H9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC38A1Q9H2H9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC38A1Q9H2H9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SLC38A1Q9H2H9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC38A1Q9H2H9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC38A1Q9H2H9 AL592295.1-201ENST00000400984 884 ntBASIC21.55■■□□□ 1.04
SLC38A1Q9H2H9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC38A1Q9H2H9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC38A1Q9H2H9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC38A1Q9H2H9 NTF6A-201ENST00000591175 560 ntBASIC21.54■■□□□ 1.04
SLC38A1Q9H2H9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC38A1Q9H2H9 AC090877.2-201ENST00000558441 1738 ntBASIC21.54■■□□□ 1.04
SLC38A1Q9H2H9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SLC38A1Q9H2H9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC38A1Q9H2H9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC38A1Q9H2H9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC38A1Q9H2H9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC38A1Q9H2H9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC38A1Q9H2H9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC38A1Q9H2H9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC38A1Q9H2H9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC38A1Q9H2H9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC38A1Q9H2H9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC38A1Q9H2H9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
SLC38A1Q9H2H9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SLC38A1Q9H2H9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SLC38A1Q9H2H9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC38A1Q9H2H9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC38A1Q9H2H9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC38A1Q9H2H9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.51■■□□□ 1.03
SLC38A1Q9H2H9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC38A1Q9H2H9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms