Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RP1L1Q8IWN7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RP1L1Q8IWN7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
RP1L1Q8IWN7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RP1L1Q8IWN7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RP1L1Q8IWN7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RP1L1Q8IWN7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RP1L1Q8IWN7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.16■□□□□ 0.98
RP1L1Q8IWN7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RP1L1Q8IWN7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RP1L1Q8IWN7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RP1L1Q8IWN7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RP1L1Q8IWN7 AC034268.1-201ENST00000441047 882 ntBASIC21.16■□□□□ 0.98
RP1L1Q8IWN7 AP004609.3-201ENST00000610705 1884 ntBASIC21.15■□□□□ 0.98
RP1L1Q8IWN7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RP1L1Q8IWN7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RP1L1Q8IWN7 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.15■□□□□ 0.98
RP1L1Q8IWN7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RP1L1Q8IWN7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RP1L1Q8IWN7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.15■□□□□ 0.98
RP1L1Q8IWN7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RP1L1Q8IWN7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
RP1L1Q8IWN7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RP1L1Q8IWN7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.14■□□□□ 0.98
RP1L1Q8IWN7 SNX5-217ENST00000606557 1087 ntBASIC21.14■□□□□ 0.98
RP1L1Q8IWN7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RP1L1Q8IWN7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RP1L1Q8IWN7 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.13■□□□□ 0.97
RP1L1Q8IWN7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RP1L1Q8IWN7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RP1L1Q8IWN7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RP1L1Q8IWN7 SYT6-210ENST00000641643 1587 ntBASIC21.13■□□□□ 0.97
RP1L1Q8IWN7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.13■□□□□ 0.97
RP1L1Q8IWN7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RP1L1Q8IWN7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RP1L1Q8IWN7 MIR939-201ENST00000401314 82 ntBASIC21.12■□□□□ 0.97
RP1L1Q8IWN7 AP001330.3-201ENST00000520123 633 ntBASIC21.12■□□□□ 0.97
RP1L1Q8IWN7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.12■□□□□ 0.97
RP1L1Q8IWN7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RP1L1Q8IWN7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RP1L1Q8IWN7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RP1L1Q8IWN7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RP1L1Q8IWN7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.11■□□□□ 0.97
RP1L1Q8IWN7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
RP1L1Q8IWN7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.11■□□□□ 0.97
RP1L1Q8IWN7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.11■□□□□ 0.97
RP1L1Q8IWN7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RP1L1Q8IWN7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RP1L1Q8IWN7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RP1L1Q8IWN7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RP1L1Q8IWN7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RP1L1Q8IWN7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.1■□□□□ 0.97
RP1L1Q8IWN7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.1■□□□□ 0.97
RP1L1Q8IWN7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.1■□□□□ 0.97
RP1L1Q8IWN7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RP1L1Q8IWN7 AC142472.1-201ENST00000612013 1741 ntBASIC21.09■□□□□ 0.97
RP1L1Q8IWN7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RP1L1Q8IWN7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RP1L1Q8IWN7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.09■□□□□ 0.97
RP1L1Q8IWN7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.09■□□□□ 0.97
RP1L1Q8IWN7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RP1L1Q8IWN7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RP1L1Q8IWN7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RP1L1Q8IWN7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RP1L1Q8IWN7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RP1L1Q8IWN7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RP1L1Q8IWN7 AC091305.1-201ENST00000479476 895 ntBASIC21.08■□□□□ 0.97
RP1L1Q8IWN7 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.08■□□□□ 0.97
RP1L1Q8IWN7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RP1L1Q8IWN7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RP1L1Q8IWN7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RP1L1Q8IWN7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
RP1L1Q8IWN7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.08■□□□□ 0.96
RP1L1Q8IWN7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RP1L1Q8IWN7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.07■□□□□ 0.96
RP1L1Q8IWN7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RP1L1Q8IWN7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RP1L1Q8IWN7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RP1L1Q8IWN7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.07■□□□□ 0.96
RP1L1Q8IWN7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RP1L1Q8IWN7 AL136162.1-201ENST00000607711 1078 ntBASIC21.07■□□□□ 0.96
RP1L1Q8IWN7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RP1L1Q8IWN7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RP1L1Q8IWN7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.06■□□□□ 0.96
RP1L1Q8IWN7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RP1L1Q8IWN7 AC090192.1-201ENST00000517740 490 ntBASIC21.06■□□□□ 0.96
RP1L1Q8IWN7 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.06■□□□□ 0.96
RP1L1Q8IWN7 AL136967.2-201ENST00000623968 743 ntBASIC21.06■□□□□ 0.96
RP1L1Q8IWN7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RP1L1Q8IWN7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RP1L1Q8IWN7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RP1L1Q8IWN7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RP1L1Q8IWN7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RP1L1Q8IWN7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.05■□□□□ 0.96
RP1L1Q8IWN7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.05■□□□□ 0.96
RP1L1Q8IWN7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RP1L1Q8IWN7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RP1L1Q8IWN7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RP1L1Q8IWN7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.04■□□□□ 0.96
RP1L1Q8IWN7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms