Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CRLF3Q8IUI8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.19■■□□□ 1.3
CRLF3Q8IUI8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CRLF3Q8IUI8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CRLF3Q8IUI8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CRLF3Q8IUI8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CRLF3Q8IUI8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CRLF3Q8IUI8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CRLF3Q8IUI8 AC004812.2-201ENST00000611079 2094 ntBASIC23.18■■□□□ 1.3
CRLF3Q8IUI8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CRLF3Q8IUI8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CRLF3Q8IUI8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.18■■□□□ 1.3
CRLF3Q8IUI8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CRLF3Q8IUI8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CRLF3Q8IUI8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRLF3Q8IUI8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CRLF3Q8IUI8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRLF3Q8IUI8 AC092296.2-201ENST00000589470 999 ntBASIC23.17■■□□□ 1.3
CRLF3Q8IUI8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CRLF3Q8IUI8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CRLF3Q8IUI8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRLF3Q8IUI8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRLF3Q8IUI8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRLF3Q8IUI8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.16■■□□□ 1.3
CRLF3Q8IUI8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRLF3Q8IUI8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.15■■□□□ 1.3
CRLF3Q8IUI8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.15■■□□□ 1.3
CRLF3Q8IUI8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.15■■□□□ 1.3
CRLF3Q8IUI8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CRLF3Q8IUI8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.14■■□□□ 1.3
CRLF3Q8IUI8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CRLF3Q8IUI8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.14■■□□□ 1.3
CRLF3Q8IUI8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CRLF3Q8IUI8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CRLF3Q8IUI8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CRLF3Q8IUI8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CRLF3Q8IUI8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CRLF3Q8IUI8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CRLF3Q8IUI8 AC079834.2-201ENST00000609776 1949 ntBASIC23.14■■□□□ 1.29
CRLF3Q8IUI8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.14■■□□□ 1.29
CRLF3Q8IUI8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.13■■□□□ 1.29
CRLF3Q8IUI8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.13■■□□□ 1.29
CRLF3Q8IUI8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CRLF3Q8IUI8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CRLF3Q8IUI8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.13■■□□□ 1.29
CRLF3Q8IUI8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CRLF3Q8IUI8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.12■■□□□ 1.29
CRLF3Q8IUI8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CRLF3Q8IUI8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CRLF3Q8IUI8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.12■■□□□ 1.29
CRLF3Q8IUI8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CRLF3Q8IUI8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CRLF3Q8IUI8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.11■■□□□ 1.29
CRLF3Q8IUI8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.11■■□□□ 1.29
CRLF3Q8IUI8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CRLF3Q8IUI8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CRLF3Q8IUI8 ECEL1P2-201ENST00000461596 1295 ntBASIC23.1■■□□□ 1.29
CRLF3Q8IUI8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
CRLF3Q8IUI8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CRLF3Q8IUI8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.1■■□□□ 1.29
CRLF3Q8IUI8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CRLF3Q8IUI8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CRLF3Q8IUI8 ABCB10P4-201ENST00000566803 2184 ntBASIC23.1■■□□□ 1.29
CRLF3Q8IUI8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CRLF3Q8IUI8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CRLF3Q8IUI8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.09■■□□□ 1.29
CRLF3Q8IUI8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.09■■□□□ 1.29
CRLF3Q8IUI8 AL157400.5-201ENST00000507624 621 ntBASIC23.09■■□□□ 1.29
CRLF3Q8IUI8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CRLF3Q8IUI8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CRLF3Q8IUI8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.09■■□□□ 1.29
CRLF3Q8IUI8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.09■■□□□ 1.29
CRLF3Q8IUI8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CRLF3Q8IUI8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CRLF3Q8IUI8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CRLF3Q8IUI8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CRLF3Q8IUI8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.08■■□□□ 1.28
CRLF3Q8IUI8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CRLF3Q8IUI8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.07■■□□□ 1.28
CRLF3Q8IUI8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.07■■□□□ 1.28
CRLF3Q8IUI8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CRLF3Q8IUI8 MIR6089-201ENST00000616698 64 ntBASIC23.07■■□□□ 1.28
CRLF3Q8IUI8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CRLF3Q8IUI8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CRLF3Q8IUI8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CRLF3Q8IUI8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CRLF3Q8IUI8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CRLF3Q8IUI8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CRLF3Q8IUI8 NTF6A-201ENST00000591175 560 ntBASIC23.06■■□□□ 1.28
CRLF3Q8IUI8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.06■■□□□ 1.28
CRLF3Q8IUI8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.05■■□□□ 1.28
CRLF3Q8IUI8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CRLF3Q8IUI8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CRLF3Q8IUI8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CRLF3Q8IUI8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.05■■□□□ 1.28
CRLF3Q8IUI8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms