Protein–RNA interactions for Protein: Q7Z5N4

SDK1, Protein sidekick-1, humanhuman

Predictions only

Length 2,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1Q7Z5N4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
SDK1Q7Z5N4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SDK1Q7Z5N4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
SDK1Q7Z5N4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
SDK1Q7Z5N4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SDK1Q7Z5N4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SDK1Q7Z5N4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SDK1Q7Z5N4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
SDK1Q7Z5N4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
SDK1Q7Z5N4 AP001330.3-201ENST00000520123 633 ntBASIC23.31■■□□□ 1.32
SDK1Q7Z5N4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.31■■□□□ 1.32
SDK1Q7Z5N4 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.31■■□□□ 1.32
SDK1Q7Z5N4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.31■■□□□ 1.32
SDK1Q7Z5N4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
SDK1Q7Z5N4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
SDK1Q7Z5N4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
SDK1Q7Z5N4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.31■■□□□ 1.32
SDK1Q7Z5N4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
SDK1Q7Z5N4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SDK1Q7Z5N4 AC097381.1-201ENST00000429019 1296 ntBASIC23.3■■□□□ 1.32
SDK1Q7Z5N4 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.3■■□□□ 1.32
SDK1Q7Z5N4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SDK1Q7Z5N4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SDK1Q7Z5N4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
SDK1Q7Z5N4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.29■■□□□ 1.32
SDK1Q7Z5N4 AL136967.2-201ENST00000623968 743 ntBASIC23.29■■□□□ 1.32
SDK1Q7Z5N4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.29■■□□□ 1.32
SDK1Q7Z5N4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SDK1Q7Z5N4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.29■■□□□ 1.32
SDK1Q7Z5N4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.29■■□□□ 1.32
SDK1Q7Z5N4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SDK1Q7Z5N4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SDK1Q7Z5N4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SDK1Q7Z5N4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SDK1Q7Z5N4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SDK1Q7Z5N4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SDK1Q7Z5N4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SDK1Q7Z5N4 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.27■■□□□ 1.32
SDK1Q7Z5N4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.27■■□□□ 1.32
SDK1Q7Z5N4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.27■■□□□ 1.32
SDK1Q7Z5N4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SDK1Q7Z5N4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.27■■□□□ 1.32
SDK1Q7Z5N4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.31
SDK1Q7Z5N4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
SDK1Q7Z5N4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.27■■□□□ 1.31
SDK1Q7Z5N4 MIR6821-201ENST00000617625 74 ntBASIC23.27■■□□□ 1.31
SDK1Q7Z5N4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.27■■□□□ 1.31
SDK1Q7Z5N4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SDK1Q7Z5N4 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.26■■□□□ 1.31
SDK1Q7Z5N4 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.26■■□□□ 1.31
SDK1Q7Z5N4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SDK1Q7Z5N4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SDK1Q7Z5N4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.25■■□□□ 1.31
SDK1Q7Z5N4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.25■■□□□ 1.31
SDK1Q7Z5N4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.25■■□□□ 1.31
SDK1Q7Z5N4 MIR939-201ENST00000401314 82 ntBASIC23.25■■□□□ 1.31
SDK1Q7Z5N4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SDK1Q7Z5N4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SDK1Q7Z5N4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.25■■□□□ 1.31
SDK1Q7Z5N4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.25■■□□□ 1.31
SDK1Q7Z5N4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
SDK1Q7Z5N4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.24■■□□□ 1.31
SDK1Q7Z5N4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.24■■□□□ 1.31
SDK1Q7Z5N4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SDK1Q7Z5N4 SYT6-210ENST00000641643 1587 ntBASIC23.24■■□□□ 1.31
SDK1Q7Z5N4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
SDK1Q7Z5N4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SDK1Q7Z5N4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.24■■□□□ 1.31
SDK1Q7Z5N4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SDK1Q7Z5N4 FOXO3B-201ENST00000395675 1928 ntBASIC23.24■■□□□ 1.31
SDK1Q7Z5N4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SDK1Q7Z5N4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SDK1Q7Z5N4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.23■■□□□ 1.31
SDK1Q7Z5N4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SDK1Q7Z5N4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SDK1Q7Z5N4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SDK1Q7Z5N4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.23■■□□□ 1.31
SDK1Q7Z5N4 MIR6722-201ENST00000617286 78 ntBASIC23.23■■□□□ 1.31
SDK1Q7Z5N4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SDK1Q7Z5N4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SDK1Q7Z5N4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SDK1Q7Z5N4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.22■■□□□ 1.31
SDK1Q7Z5N4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SDK1Q7Z5N4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SDK1Q7Z5N4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SDK1Q7Z5N4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
SDK1Q7Z5N4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SDK1Q7Z5N4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.21■■□□□ 1.31
SDK1Q7Z5N4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SDK1Q7Z5N4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SDK1Q7Z5N4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.2■■□□□ 1.31
SDK1Q7Z5N4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
SDK1Q7Z5N4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.2■■□□□ 1.3
SDK1Q7Z5N4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.2■■□□□ 1.3
SDK1Q7Z5N4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.2■■□□□ 1.3
SDK1Q7Z5N4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.2■■□□□ 1.3
SDK1Q7Z5N4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SDK1Q7Z5N4 RASA4CP-201ENST00000424092 1398 ntBASIC23.19■■□□□ 1.3
SDK1Q7Z5N4 AC034268.1-201ENST00000441047 882 ntBASIC23.19■■□□□ 1.3
SDK1Q7Z5N4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms