Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.48■□□□□ 0.23
CSMD3Q7Z407 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.48■□□□□ 0.23
CSMD3Q7Z407 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD3Q7Z407 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CSMD3Q7Z407 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD3Q7Z407 AC091305.1-201ENST00000479476 895 ntBASIC16.48■□□□□ 0.23
CSMD3Q7Z407 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.48■□□□□ 0.23
CSMD3Q7Z407 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD3Q7Z407 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD3Q7Z407 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD3Q7Z407 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
CSMD3Q7Z407 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD3Q7Z407 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD3Q7Z407 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.47■□□□□ 0.23
CSMD3Q7Z407 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.47■□□□□ 0.23
CSMD3Q7Z407 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CSMD3Q7Z407 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD3Q7Z407 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD3Q7Z407 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD3Q7Z407 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD3Q7Z407 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CSMD3Q7Z407 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD3Q7Z407 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CSMD3Q7Z407 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSMD3Q7Z407 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.46■□□□□ 0.23
CSMD3Q7Z407 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.46■□□□□ 0.23
CSMD3Q7Z407 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.46■□□□□ 0.23
CSMD3Q7Z407 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.46■□□□□ 0.23
CSMD3Q7Z407 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CSMD3Q7Z407 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSMD3Q7Z407 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.46■□□□□ 0.23
CSMD3Q7Z407 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.46■□□□□ 0.22
CSMD3Q7Z407 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSMD3Q7Z407 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSMD3Q7Z407 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.45■□□□□ 0.22
CSMD3Q7Z407 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.45■□□□□ 0.22
CSMD3Q7Z407 FOXO3B-201ENST00000395675 1928 ntBASIC16.45■□□□□ 0.22
CSMD3Q7Z407 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSMD3Q7Z407 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CSMD3Q7Z407 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.45■□□□□ 0.22
CSMD3Q7Z407 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSMD3Q7Z407 SYT6-210ENST00000641643 1587 ntBASIC16.45■□□□□ 0.22
CSMD3Q7Z407 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSMD3Q7Z407 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.44■□□□□ 0.22
CSMD3Q7Z407 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CSMD3Q7Z407 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC16.44■□□□□ 0.22
CSMD3Q7Z407 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSMD3Q7Z407 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.44■□□□□ 0.22
CSMD3Q7Z407 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSMD3Q7Z407 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CSMD3Q7Z407 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.43■□□□□ 0.22
CSMD3Q7Z407 CA15P2-201ENST00000611168 834 ntBASIC16.43■□□□□ 0.22
CSMD3Q7Z407 IKBKGP1-201ENST00000612193 1073 ntBASIC16.43■□□□□ 0.22
CSMD3Q7Z407 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CSMD3Q7Z407 IRS3P-201ENST00000223076 1006 ntBASIC16.43■□□□□ 0.22
CSMD3Q7Z407 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.43■□□□□ 0.22
CSMD3Q7Z407 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.43■□□□□ 0.22
CSMD3Q7Z407 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.43■□□□□ 0.22
CSMD3Q7Z407 AC092437.1-201ENST00000624794 1048 ntBASIC16.43■□□□□ 0.22
CSMD3Q7Z407 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.42■□□□□ 0.22
CSMD3Q7Z407 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.42■□□□□ 0.22
CSMD3Q7Z407 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD3Q7Z407 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.42■□□□□ 0.22
CSMD3Q7Z407 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD3Q7Z407 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.41■□□□□ 0.22
CSMD3Q7Z407 ST7-202ENST00000323984 2142 ntTSL 5 BASIC16.41■□□□□ 0.22
CSMD3Q7Z407 ST7-207ENST00000393449 2127 ntTSL 5 BASIC16.41■□□□□ 0.22
CSMD3Q7Z407 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.41■□□□□ 0.22
CSMD3Q7Z407 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD3Q7Z407 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD3Q7Z407 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.41■□□□□ 0.22
CSMD3Q7Z407 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD3Q7Z407 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CSMD3Q7Z407 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD3Q7Z407 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD3Q7Z407 AC034268.1-201ENST00000441047 882 ntBASIC16.41■□□□□ 0.22
CSMD3Q7Z407 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.41■□□□□ 0.22
CSMD3Q7Z407 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD3Q7Z407 AC022517.1-201ENST00000592429 346 ntBASIC16.41■□□□□ 0.22
CSMD3Q7Z407 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD3Q7Z407 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CSMD3Q7Z407 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.4■□□□□ 0.22
CSMD3Q7Z407 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.4■□□□□ 0.22
CSMD3Q7Z407 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.4■□□□□ 0.22
CSMD3Q7Z407 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CSMD3Q7Z407 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC16.4■□□□□ 0.22
CSMD3Q7Z407 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CSMD3Q7Z407 AP004609.3-201ENST00000610705 1884 ntBASIC16.4■□□□□ 0.22
CSMD3Q7Z407 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD3Q7Z407 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC16.4■□□□□ 0.22
CSMD3Q7Z407 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.4■□□□□ 0.22
CSMD3Q7Z407 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CSMD3Q7Z407 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD3Q7Z407 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.39■□□□□ 0.21
CSMD3Q7Z407 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.39■□□□□ 0.21
CSMD3Q7Z407 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD3Q7Z407 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.39■□□□□ 0.21
CSMD3Q7Z407 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CSMD3Q7Z407 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.39■□□□□ 0.21
CSMD3Q7Z407 AL031602.1-201ENST00000633169 911 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms