Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AL136162.1-201ENST00000607711 1078 ntBASIC25.1■■□□□ 1.61
CSPG5O95196 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.1■■□□□ 1.61
CSPG5O95196 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.1■■□□□ 1.61
CSPG5O95196 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CSPG5O95196 AC133561.4-201ENST00000566112 224 ntBASIC25.09■■□□□ 1.61
CSPG5O95196 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CSPG5O95196 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CSPG5O95196 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.08■■□□□ 1.61
CSPG5O95196 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.08■■□□□ 1.61
CSPG5O95196 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.07■■□□□ 1.6
CSPG5O95196 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.07■■□□□ 1.6
CSPG5O95196 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.07■■□□□ 1.6
CSPG5O95196 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CSPG5O95196 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.07■■□□□ 1.6
CSPG5O95196 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CSPG5O95196 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.06■■□□□ 1.6
CSPG5O95196 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
CSPG5O95196 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CSPG5O95196 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
CSPG5O95196 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CSPG5O95196 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
CSPG5O95196 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CSPG5O95196 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CSPG5O95196 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CSPG5O95196 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CSPG5O95196 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
CSPG5O95196 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CSPG5O95196 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CSPG5O95196 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CSPG5O95196 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CSPG5O95196 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.04■■□□□ 1.6
CSPG5O95196 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CSPG5O95196 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.04■■□□□ 1.6
CSPG5O95196 SNX5-217ENST00000606557 1087 ntBASIC25.04■■□□□ 1.6
CSPG5O95196 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CSPG5O95196 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CSPG5O95196 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CSPG5O95196 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CSPG5O95196 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CSPG5O95196 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CSPG5O95196 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CSPG5O95196 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CSPG5O95196 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.03■■□□□ 1.6
CSPG5O95196 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.03■■□□□ 1.6
CSPG5O95196 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.03■■□□□ 1.6
CSPG5O95196 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.03■■□□□ 1.6
CSPG5O95196 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CSPG5O95196 AC135279.3-201ENST00000610945 1311 ntBASIC25.03■■□□□ 1.6
CSPG5O95196 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.02■■□□□ 1.6
CSPG5O95196 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CSPG5O95196 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CSPG5O95196 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CSPG5O95196 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CSPG5O95196 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CSPG5O95196 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CSPG5O95196 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CSPG5O95196 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
CSPG5O95196 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.01■■□□□ 1.59
CSPG5O95196 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.01■■□□□ 1.59
CSPG5O95196 AC024257.2-201ENST00000549699 147 ntBASIC25.01■■□□□ 1.59
CSPG5O95196 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.01■■□□□ 1.59
CSPG5O95196 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
CSPG5O95196 AC026271.2-201ENST00000428091 497 ntBASIC25■■□□□ 1.59
CSPG5O95196 AL031432.3-201ENST00000607698 485 ntBASIC25■■□□□ 1.59
CSPG5O95196 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CSPG5O95196 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CSPG5O95196 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CSPG5O95196 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CSPG5O95196 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25■■□□□ 1.59
CSPG5O95196 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
CSPG5O95196 SRD5A1P1-201ENST00000442297 786 ntBASIC24.99■■□□□ 1.59
CSPG5O95196 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CSPG5O95196 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CSPG5O95196 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.98■■□□□ 1.59
CSPG5O95196 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.98■■□□□ 1.59
CSPG5O95196 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CSPG5O95196 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CSPG5O95196 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.98■■□□□ 1.59
CSPG5O95196 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CSPG5O95196 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.98■■□□□ 1.59
CSPG5O95196 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CSPG5O95196 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CSPG5O95196 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.97■■□□□ 1.59
CSPG5O95196 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
CSPG5O95196 AC105265.2-201ENST00000467189 838 ntBASIC24.97■■□□□ 1.59
CSPG5O95196 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.97■■□□□ 1.59
CSPG5O95196 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CSPG5O95196 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CSPG5O95196 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
CSPG5O95196 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CSPG5O95196 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.96■■□□□ 1.59
CSPG5O95196 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CSPG5O95196 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
CSPG5O95196 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.96■■□□□ 1.59
CSPG5O95196 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.96■■□□□ 1.59
CSPG5O95196 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.96■■□□□ 1.59
CSPG5O95196 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.96■■□□□ 1.59
CSPG5O95196 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.96■■□□□ 1.59
CSPG5O95196 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CSPG5O95196 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms