Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC189A1A4V9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
CCDC189A1A4V9 MIR6089-201ENST00000616698 64 ntBASIC23.24■■□□□ 1.31
CCDC189A1A4V9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC189A1A4V9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC189A1A4V9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC189A1A4V9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC189A1A4V9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CCDC189A1A4V9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC189A1A4V9 RNF165-205ENST00000588679 2904 ntBASIC23.23■■□□□ 1.31
CCDC189A1A4V9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC189A1A4V9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CCDC189A1A4V9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.22■■□□□ 1.31
CCDC189A1A4V9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.22■■□□□ 1.31
CCDC189A1A4V9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC189A1A4V9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC189A1A4V9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC189A1A4V9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC189A1A4V9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.22■■□□□ 1.31
CCDC189A1A4V9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.22■■□□□ 1.31
CCDC189A1A4V9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CCDC189A1A4V9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CCDC189A1A4V9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC189A1A4V9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC189A1A4V9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC189A1A4V9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC189A1A4V9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.2■■□□□ 1.3
CCDC189A1A4V9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC189A1A4V9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.2■■□□□ 1.3
CCDC189A1A4V9 AC141586.4-201ENST00000624558 1573 ntBASIC23.2■■□□□ 1.3
CCDC189A1A4V9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.2■■□□□ 1.3
CCDC189A1A4V9 GPX1-201ENST00000419349 1106 ntBASIC23.2■■□□□ 1.3
CCDC189A1A4V9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.2■■□□□ 1.3
CCDC189A1A4V9 C9orf163-202ENST00000624034 2573 ntBASIC23.19■■□□□ 1.3
CCDC189A1A4V9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.19■■□□□ 1.3
CCDC189A1A4V9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC189A1A4V9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.19■■□□□ 1.3
CCDC189A1A4V9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC189A1A4V9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC189A1A4V9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC189A1A4V9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC189A1A4V9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.19■■□□□ 1.3
CCDC189A1A4V9 AC026202.3-201ENST00000600805 1127 ntBASIC23.19■■□□□ 1.3
CCDC189A1A4V9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.19■■□□□ 1.3
CCDC189A1A4V9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CCDC189A1A4V9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.19■■□□□ 1.3
CCDC189A1A4V9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC189A1A4V9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.18■■□□□ 1.3
CCDC189A1A4V9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC189A1A4V9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC189A1A4V9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC189A1A4V9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC189A1A4V9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC189A1A4V9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CCDC189A1A4V9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC189A1A4V9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC189A1A4V9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.18■■□□□ 1.3
CCDC189A1A4V9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC189A1A4V9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC189A1A4V9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CCDC189A1A4V9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC189A1A4V9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC189A1A4V9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC189A1A4V9 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.16■■□□□ 1.3
CCDC189A1A4V9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.16■■□□□ 1.3
CCDC189A1A4V9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
CCDC189A1A4V9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
CCDC189A1A4V9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.16■■□□□ 1.3
CCDC189A1A4V9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC189A1A4V9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC189A1A4V9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC189A1A4V9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.15■■□□□ 1.3
CCDC189A1A4V9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.15■■□□□ 1.3
CCDC189A1A4V9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC189A1A4V9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC189A1A4V9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
CCDC189A1A4V9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
CCDC189A1A4V9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.14■■□□□ 1.3
CCDC189A1A4V9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CCDC189A1A4V9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC189A1A4V9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CCDC189A1A4V9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC189A1A4V9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.13■■□□□ 1.29
CCDC189A1A4V9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC189A1A4V9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CCDC189A1A4V9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.13■■□□□ 1.29
CCDC189A1A4V9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.13■■□□□ 1.29
CCDC189A1A4V9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC189A1A4V9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC189A1A4V9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC189A1A4V9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.12■■□□□ 1.29
CCDC189A1A4V9 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CCDC189A1A4V9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC189A1A4V9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC189A1A4V9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC189A1A4V9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC189A1A4V9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC189A1A4V9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CCDC189A1A4V9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC189A1A4V9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms