Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV24A0A0B4J272 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV24A0A0B4J272 AC087393.1-201ENST00000582896 145 ntBASIC19.59■□□□□ 0.73
TRAV24A0A0B4J272 MIR6765-201ENST00000614092 87 ntBASIC19.59■□□□□ 0.73
TRAV24A0A0B4J272 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV24A0A0B4J272 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV24A0A0B4J272 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV24A0A0B4J272 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV24A0A0B4J272 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV24A0A0B4J272 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV24A0A0B4J272 AC004812.2-201ENST00000611079 2094 ntBASIC19.58■□□□□ 0.73
TRAV24A0A0B4J272 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.58■□□□□ 0.72
TRAV24A0A0B4J272 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.58■□□□□ 0.72
TRAV24A0A0B4J272 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAV24A0A0B4J272 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV24A0A0B4J272 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TRAV24A0A0B4J272 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV24A0A0B4J272 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRAV24A0A0B4J272 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV24A0A0B4J272 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAV24A0A0B4J272 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TRAV24A0A0B4J272 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV24A0A0B4J272 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV24A0A0B4J272 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV24A0A0B4J272 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV24A0A0B4J272 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAV24A0A0B4J272 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV24A0A0B4J272 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TRAV24A0A0B4J272 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV24A0A0B4J272 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAV24A0A0B4J272 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV24A0A0B4J272 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.56■□□□□ 0.72
TRAV24A0A0B4J272 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
TRAV24A0A0B4J272 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV24A0A0B4J272 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRAV24A0A0B4J272 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV24A0A0B4J272 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
TRAV24A0A0B4J272 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.55■□□□□ 0.72
TRAV24A0A0B4J272 AC129492.7-201ENST00000622992 756 ntBASIC19.55■□□□□ 0.72
TRAV24A0A0B4J272 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV24A0A0B4J272 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV24A0A0B4J272 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV24A0A0B4J272 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV24A0A0B4J272 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV24A0A0B4J272 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV24A0A0B4J272 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV24A0A0B4J272 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV24A0A0B4J272 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV24A0A0B4J272 KRT18P60-201ENST00000312876 1297 ntBASIC19.53■□□□□ 0.72
TRAV24A0A0B4J272 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV24A0A0B4J272 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV24A0A0B4J272 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV24A0A0B4J272 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV24A0A0B4J272 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
TRAV24A0A0B4J272 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.53■□□□□ 0.72
TRAV24A0A0B4J272 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV24A0A0B4J272 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV24A0A0B4J272 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV24A0A0B4J272 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.53■□□□□ 0.72
TRAV24A0A0B4J272 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV24A0A0B4J272 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV24A0A0B4J272 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV24A0A0B4J272 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAV24A0A0B4J272 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRAV24A0A0B4J272 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.52■□□□□ 0.71
TRAV24A0A0B4J272 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV24A0A0B4J272 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TRAV24A0A0B4J272 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV24A0A0B4J272 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV24A0A0B4J272 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV24A0A0B4J272 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TRAV24A0A0B4J272 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV24A0A0B4J272 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV24A0A0B4J272 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV24A0A0B4J272 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
TRAV24A0A0B4J272 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV24A0A0B4J272 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV24A0A0B4J272 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV24A0A0B4J272 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV24A0A0B4J272 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV24A0A0B4J272 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV24A0A0B4J272 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV24A0A0B4J272 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV24A0A0B4J272 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV24A0A0B4J272 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV24A0A0B4J272 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV24A0A0B4J272 ABCB10P4-201ENST00000566803 2184 ntBASIC19.49■□□□□ 0.71
TRAV24A0A0B4J272 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRAV24A0A0B4J272 AC090877.2-201ENST00000558441 1738 ntBASIC19.49■□□□□ 0.71
TRAV24A0A0B4J272 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV24A0A0B4J272 AL592295.1-201ENST00000400984 884 ntBASIC19.49■□□□□ 0.71
TRAV24A0A0B4J272 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRAV24A0A0B4J272 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV24A0A0B4J272 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV24A0A0B4J272 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV24A0A0B4J272 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV24A0A0B4J272 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV24A0A0B4J272 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV24A0A0B4J272 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV24A0A0B4J272 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms