Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC23.6■■□□□ 1.37
CCER1Q8TC90 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CCER1Q8TC90 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CCER1Q8TC90 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC23.6■■□□□ 1.37
CCER1Q8TC90 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC23.6■■□□□ 1.37
CCER1Q8TC90 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CCER1Q8TC90 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCER1Q8TC90 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC23.6■■□□□ 1.37
CCER1Q8TC90 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCER1Q8TC90 AC007686.3-201ENST00000619017 3487 ntBASIC23.6■■□□□ 1.37
CCER1Q8TC90 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCER1Q8TC90 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCER1Q8TC90 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCER1Q8TC90 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCER1Q8TC90 NEK7-201ENST00000367383 586 ntTSL 2 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 FAM220BP-201ENST00000377689 816 ntBASIC23.59■■□□□ 1.37
CCER1Q8TC90 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCER1Q8TC90 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 AL450472.2-201ENST00000603663 1156 ntBASIC23.59■■□□□ 1.37
CCER1Q8TC90 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCER1Q8TC90 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCER1Q8TC90 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCER1Q8TC90 COCH-203ENST00000460581 2688 ntTSL 2 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCER1Q8TC90 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCER1Q8TC90 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCER1Q8TC90 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
CCER1Q8TC90 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCER1Q8TC90 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCER1Q8TC90 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC23.58■■□□□ 1.37
CCER1Q8TC90 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC23.58■■□□□ 1.37
CCER1Q8TC90 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC23.58■■□□□ 1.37
CCER1Q8TC90 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC23.58■■□□□ 1.37
CCER1Q8TC90 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCER1Q8TC90 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCER1Q8TC90 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CCER1Q8TC90 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCER1Q8TC90 CBR1-202ENST00000399191 838 ntTSL 3 BASIC23.58■■□□□ 1.37
CCER1Q8TC90 ADH5P3-201ENST00000433842 1137 ntBASIC23.58■■□□□ 1.37
CCER1Q8TC90 SPCS2P4-201ENST00000436160 681 ntBASIC23.58■■□□□ 1.37
CCER1Q8TC90 AL591424.1-201ENST00000442569 1213 ntBASIC23.58■■□□□ 1.37
CCER1Q8TC90 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC23.58■■□□□ 1.37
CCER1Q8TC90 AC106730.1-201ENST00000566722 1090 ntBASIC23.58■■□□□ 1.37
CCER1Q8TC90 AP000842.3-202ENST00000569238 1080 ntBASIC23.58■■□□□ 1.37
CCER1Q8TC90 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CCER1Q8TC90 AC120114.3-201ENST00000611923 658 ntBASIC23.58■■□□□ 1.37
CCER1Q8TC90 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CCER1Q8TC90 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC23.58■■□□□ 1.37
CCER1Q8TC90 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
CCER1Q8TC90 LINC00528-201ENST00000600723 2160 ntBASIC23.58■■□□□ 1.36
CCER1Q8TC90 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
CCER1Q8TC90 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.36
CCER1Q8TC90 KRT8P37-201ENST00000451609 1420 ntBASIC23.58■■□□□ 1.36
CCER1Q8TC90 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CCER1Q8TC90 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CCER1Q8TC90 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC23.58■■□□□ 1.36
CCER1Q8TC90 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC23.57■■□□□ 1.36
CCER1Q8TC90 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 CICP23-201ENST00000605013 2741 ntBASIC23.57■■□□□ 1.36
CCER1Q8TC90 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
CCER1Q8TC90 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CCER1Q8TC90 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CCER1Q8TC90 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC23.57■■□□□ 1.36
CCER1Q8TC90 FDX1P1-201ENST00000449115 551 ntBASIC23.57■■□□□ 1.36
CCER1Q8TC90 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC23.57■■□□□ 1.36
CCER1Q8TC90 KRT8P48-201ENST00000515599 1220 ntBASIC23.57■■□□□ 1.36
CCER1Q8TC90 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CCER1Q8TC90 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC23.57■■□□□ 1.36
CCER1Q8TC90 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
CCER1Q8TC90 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC23.57■■□□□ 1.36
CCER1Q8TC90 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CCER1Q8TC90 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC23.57■■□□□ 1.36
CCER1Q8TC90 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CCER1Q8TC90 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms