Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC83Q8IWF9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 SPDYE14P-201ENST00000442619 822 ntBASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 DNAJB3-201ENST00000446806 729 ntBASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 AC003101.2-201ENST00000612557 442 ntBASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC83Q8IWF9 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 AC112482.1-201ENST00000492080 688 ntBASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 CICP24-201ENST00000605464 2705 ntBASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC83Q8IWF9 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 AC136604.1-201ENST00000418535 575 ntBASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 343.5 ms