Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
RPL39P62891 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
RPL39P62891 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
RPL39P62891 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
RPL39P62891 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 WASH6P-202ENST00000359512 1437 ntBASIC11.21□□□□□ -0.61
RPL39P62891 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.21□□□□□ -0.61
RPL39P62891 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.21□□□□□ -0.61
RPL39P62891 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
RPL39P62891 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.21□□□□□ -0.61
RPL39P62891 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
RPL39P62891 AC136632.2-201ENST00000512891 861 ntBASIC11.21□□□□□ -0.61
RPL39P62891 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.21□□□□□ -0.61
RPL39P62891 AC021087.4-201ENST00000563761 564 ntBASIC11.21□□□□□ -0.61
RPL39P62891 AL049597.2-201ENST00000565575 961 ntBASIC11.21□□□□□ -0.61
RPL39P62891 AC087388.1-201ENST00000571370 1112 ntBASIC11.21□□□□□ -0.61
RPL39P62891 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.21□□□□□ -0.61
RPL39P62891 AC008667.4-201ENST00000607370 168 ntBASIC11.21□□□□□ -0.61
RPL39P62891 ACTL9-202ENST00000612068 1252 ntBASIC11.21□□□□□ -0.61
RPL39P62891 AP000550.4-202ENST00000639755 178 ntBASIC11.21□□□□□ -0.61
RPL39P62891 AC107918.4-202ENST00000641623 219 ntBASIC11.21□□□□□ -0.61
RPL39P62891 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC11.21□□□□□ -0.61
RPL39P62891 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.21□□□□□ -0.61
RPL39P62891 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.21□□□□□ -0.62
RPL39P62891 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.21□□□□□ -0.62
RPL39P62891 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RPL39P62891 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RPL39P62891 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
RPL39P62891 SRC-202ENST00000373558 4304 ntTSL 5 BASIC11.21□□□□□ -0.62
RPL39P62891 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
RPL39P62891 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.21□□□□□ -0.62
RPL39P62891 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.21□□□□□ -0.62
RPL39P62891 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
RPL39P62891 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
RPL39P62891 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
RPL39P62891 LINC01230-201ENST00000625222 3017 ntBASIC11.21□□□□□ -0.62
RPL39P62891 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RPL39P62891 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.21□□□□□ -0.62
RPL39P62891 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
RPL39P62891 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
RPL39P62891 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
RPL39P62891 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RPL39P62891 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.21□□□□□ -0.62
RPL39P62891 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
RPL39P62891 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.21□□□□□ -0.62
RPL39P62891 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.62
RPL39P62891 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RPL39P62891 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.2□□□□□ -0.62
RPL39P62891 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.2□□□□□ -0.62
RPL39P62891 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.2□□□□□ -0.62
RPL39P62891 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
RPL39P62891 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.2□□□□□ -0.62
RPL39P62891 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC11.2□□□□□ -0.62
RPL39P62891 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.2□□□□□ -0.62
RPL39P62891 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.2□□□□□ -0.62
RPL39P62891 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.2□□□□□ -0.62
RPL39P62891 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.2□□□□□ -0.62
RPL39P62891 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.2□□□□□ -0.62
RPL39P62891 AC073621.1-201ENST00000392730 636 ntBASIC11.2□□□□□ -0.62
RPL39P62891 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.2□□□□□ -0.62
RPL39P62891 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.2□□□□□ -0.62
RPL39P62891 ATP5G2P1-201ENST00000433580 426 ntBASIC11.2□□□□□ -0.62
RPL39P62891 NME3-204ENST00000563498 920 ntTSL 2 BASIC11.2□□□□□ -0.62
RPL39P62891 MIR3909-201ENST00000579518 119 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms