Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 AL080243.2-201ENST00000418783 582 ntBASIC16.28■□□□□ 0.2
HDAC11Q96DB2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 CETN4P-206ENST00000642099 2168 ntBASIC16.28■□□□□ 0.2
HDAC11Q96DB2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.28■□□□□ 0.2
HDAC11Q96DB2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 AC092850.2-201ENST00000623821 2697 ntBASIC16.28■□□□□ 0.2
HDAC11Q96DB2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.27■□□□□ 0.2
HDAC11Q96DB2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 AC025678.2-201ENST00000562061 970 ntBASIC16.27■□□□□ 0.2
HDAC11Q96DB2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 AL589739.1-201ENST00000607720 493 ntBASIC16.27■□□□□ 0.2
HDAC11Q96DB2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC11Q96DB2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HDAC11Q96DB2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HDAC11Q96DB2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HDAC11Q96DB2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HDAC11Q96DB2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HDAC11Q96DB2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HDAC11Q96DB2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.27■□□□□ 0.19
HDAC11Q96DB2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HDAC11Q96DB2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.27■□□□□ 0.19
HDAC11Q96DB2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
HDAC11Q96DB2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.27■□□□□ 0.19
HDAC11Q96DB2 LINC00554-201ENST00000564841 3011 ntBASIC16.27■□□□□ 0.19
HDAC11Q96DB2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.27■□□□□ 0.19
HDAC11Q96DB2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.26■□□□□ 0.19
HDAC11Q96DB2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HDAC11Q96DB2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HDAC11Q96DB2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.26■□□□□ 0.19
HDAC11Q96DB2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.26■□□□□ 0.19
HDAC11Q96DB2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HDAC11Q96DB2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HDAC11Q96DB2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.26■□□□□ 0.19
HDAC11Q96DB2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HDAC11Q96DB2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HDAC11Q96DB2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HDAC11Q96DB2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HDAC11Q96DB2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
HDAC11Q96DB2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms