Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC10.56□□□□□ -0.72
SCXQ7RTU7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SCXQ7RTU7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SCXQ7RTU7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
SCXQ7RTU7 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SCXQ7RTU7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
SCXQ7RTU7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
SCXQ7RTU7 SLC9A3P2-201ENST00000447821 2021 ntBASIC10.56□□□□□ -0.72
SCXQ7RTU7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
SCXQ7RTU7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
SCXQ7RTU7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SCXQ7RTU7 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
SCXQ7RTU7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SCXQ7RTU7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SCXQ7RTU7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SCXQ7RTU7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
SCXQ7RTU7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SCXQ7RTU7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC10.56□□□□□ -0.72
SCXQ7RTU7 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SCXQ7RTU7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
SCXQ7RTU7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
SCXQ7RTU7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SCXQ7RTU7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
SCXQ7RTU7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 FO538757.1-201ENST00000623083 1397 ntBASIC10.55□□□□□ -0.72
SCXQ7RTU7 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 TREML5P-201ENST00000421694 576 ntBASIC10.55□□□□□ -0.72
SCXQ7RTU7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 COX20P2-201ENST00000452636 358 ntBASIC10.55□□□□□ -0.72
SCXQ7RTU7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SCXQ7RTU7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms