Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ASIC1P78348 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.64■□□□□ 0.41
ASIC1P78348 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ASIC1P78348 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ASIC1P78348 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ASIC1P78348 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ASIC1P78348 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ASIC1P78348 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ASIC1P78348 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ASIC1P78348 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ASIC1P78348 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ASIC1P78348 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ASIC1P78348 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.64■□□□□ 0.41
ASIC1P78348 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ASIC1P78348 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
ASIC1P78348 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ASIC1P78348 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.64■□□□□ 0.41
ASIC1P78348 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ASIC1P78348 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ASIC1P78348 AC136604.1-201ENST00000418535 575 ntBASIC17.64■□□□□ 0.41
ASIC1P78348 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.64■□□□□ 0.41
ASIC1P78348 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.64■□□□□ 0.41
ASIC1P78348 HIST3H2BA-201ENST00000436555 524 ntBASIC17.64■□□□□ 0.41
ASIC1P78348 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.64■□□□□ 0.41
ASIC1P78348 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.64■□□□□ 0.41
ASIC1P78348 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.64■□□□□ 0.41
ASIC1P78348 HLA-J-203ENST00000494367 1087 ntBASIC17.64■□□□□ 0.41
ASIC1P78348 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
ASIC1P78348 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.64■□□□□ 0.41
ASIC1P78348 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.64■□□□□ 0.41
ASIC1P78348 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ASIC1P78348 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ASIC1P78348 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
ASIC1P78348 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ASIC1P78348 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ASIC1P78348 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.64■□□□□ 0.41
ASIC1P78348 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.64■□□□□ 0.41
ASIC1P78348 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ASIC1P78348 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 CETN4P-206ENST00000642099 2168 ntBASIC17.63■□□□□ 0.41
ASIC1P78348 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.63■□□□□ 0.41
ASIC1P78348 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.63■□□□□ 0.41
ASIC1P78348 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.63■□□□□ 0.41
ASIC1P78348 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.63■□□□□ 0.41
ASIC1P78348 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
ASIC1P78348 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.63■□□□□ 0.41
ASIC1P78348 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.63■□□□□ 0.41
ASIC1P78348 Z92544.3-201ENST00000624747 417 ntBASIC17.63■□□□□ 0.41
ASIC1P78348 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ASIC1P78348 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ASIC1P78348 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ASIC1P78348 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ASIC1P78348 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.63■□□□□ 0.41
ASIC1P78348 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.63■□□□□ 0.41
ASIC1P78348 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.63■□□□□ 0.41
ASIC1P78348 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.63■□□□□ 0.41
ASIC1P78348 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.63■□□□□ 0.41
ASIC1P78348 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ASIC1P78348 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
ASIC1P78348 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.62■□□□□ 0.41
ASIC1P78348 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ASIC1P78348 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
ASIC1P78348 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ASIC1P78348 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.62■□□□□ 0.41
ASIC1P78348 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ASIC1P78348 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.62■□□□□ 0.41
ASIC1P78348 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ASIC1P78348 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
ASIC1P78348 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ASIC1P78348 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
ASIC1P78348 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ASIC1P78348 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ASIC1P78348 FO393414.2-201ENST00000405153 598 ntBASIC17.62■□□□□ 0.41
ASIC1P78348 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.62■□□□□ 0.41
ASIC1P78348 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.62■□□□□ 0.41
ASIC1P78348 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ASIC1P78348 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.62■□□□□ 0.41
ASIC1P78348 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.62■□□□□ 0.41
ASIC1P78348 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.62■□□□□ 0.41
ASIC1P78348 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.62■□□□□ 0.41
ASIC1P78348 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ASIC1P78348 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ASIC1P78348 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms