Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.52□□□□□ -0.73
PCP4P48539 EGFLAM-202ENST00000336740 3071 ntTSL 2 BASIC10.52□□□□□ -0.73
PCP4P48539 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
PCP4P48539 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PCP4P48539 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PCP4P48539 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
PCP4P48539 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC10.52□□□□□ -0.73
PCP4P48539 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC10.52□□□□□ -0.73
PCP4P48539 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
PCP4P48539 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
PCP4P48539 FOSB-204ENST00000585836 3550 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PCP4P48539 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PCP4P48539 SEMA4A-203ENST00000368284 2981 ntTSL 2 BASIC10.52□□□□□ -0.73
PCP4P48539 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
PCP4P48539 STX16-202ENST00000355957 4897 ntTSL 2 BASIC10.52□□□□□ -0.73
PCP4P48539 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.73
PCP4P48539 CANT1-202ENST00000392446 3252 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PCP4P48539 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC10.52□□□□□ -0.73
PCP4P48539 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC10.52□□□□□ -0.73
PCP4P48539 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC10.51□□□□□ -0.73
PCP4P48539 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC10.51□□□□□ -0.73
PCP4P48539 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC10.51□□□□□ -0.73
PCP4P48539 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
PCP4P48539 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
PCP4P48539 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC10.51□□□□□ -0.73
PCP4P48539 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC10.51□□□□□ -0.73
PCP4P48539 LINC02172-201ENST00000507365 2264 ntTSL 4 BASIC10.51□□□□□ -0.73
PCP4P48539 ZNF571-206ENST00000593133 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
PCP4P48539 APLF-201ENST00000303795 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 KRT8P36-201ENST00000489121 1440 ntBASIC10.51□□□□□ -0.73
PCP4P48539 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC10.51□□□□□ -0.73
PCP4P48539 SYNPO2L-201ENST00000372873 4121 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC10.51□□□□□ -0.73
PCP4P48539 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 DSCR3-201ENST00000309117 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
PCP4P48539 PCDHGC3-202ENST00000611950 2849 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
PCP4P48539 LINC00342-202ENST00000448494 2351 ntTSL 2 BASIC10.51□□□□□ -0.73
PCP4P48539 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 NEDD9-201ENST00000379433 3341 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 ERP29-201ENST00000261735 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC10.51□□□□□ -0.73
PCP4P48539 LLGL2-205ENST00000577200 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
PCP4P48539 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
PCP4P48539 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.51□□□□□ -0.73
PCP4P48539 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.51□□□□□ -0.73
PCP4P48539 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 MADD-206ENST00000402192 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC10.51□□□□□ -0.73
PCP4P48539 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PCP4P48539 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC10.5□□□□□ -0.73
PCP4P48539 AC012676.5-201ENST00000624337 1955 ntBASIC10.5□□□□□ -0.73
PCP4P48539 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC10.5□□□□□ -0.73
PCP4P48539 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 SALL4P5-201ENST00000419001 1760 ntBASIC10.5□□□□□ -0.73
PCP4P48539 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC10.5□□□□□ -0.73
PCP4P48539 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC10.5□□□□□ -0.73
PCP4P48539 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC10.5□□□□□ -0.73
PCP4P48539 HLA-G-203ENST00000376818 1127 ntBASIC10.5□□□□□ -0.73
PCP4P48539 HCG24-202ENST00000414398 717 ntTSL 3 BASIC10.5□□□□□ -0.73
PCP4P48539 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC10.5□□□□□ -0.73
PCP4P48539 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC10.5□□□□□ -0.73
PCP4P48539 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC10.5□□□□□ -0.73
PCP4P48539 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC10.5□□□□□ -0.73
PCP4P48539 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.5□□□□□ -0.73
PCP4P48539 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 ACSM5-201ENST00000331849 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PCP4P48539 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms