RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 NISCHQ9Y2I1 1504 aa19.73■□□□□ 0.75
SYNPO2L-201ENST00000372873 PELP1Q8IZL8 1130 aaKnown RBP18.84■□□□□ 0.61
SYNPO2L-201ENST00000372873 MYT1Q01538 1121 aa18.41■□□□□ 0.54
SYNPO2L-201ENST00000372873 PCGF6Q9BYE7 350 aa18.34■□□□□ 0.53
SYNPO2L-201ENST00000372873 HRCP23327 699 aa18.33■□□□□ 0.52
SYNPO2L-201ENST00000372873 SUPT5HO00267 1087 aaKnown RBP18.18■□□□□ 0.5
SYNPO2L-201ENST00000372873 DCAF8L2P0C7V8 631 aa18.13■□□□□ 0.49
SYNPO2L-201ENST00000372873 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
SYNPO2L-201ENST00000372873 PPARGC1BQ86YN6 1023 aaKnown RBP18.05■□□□□ 0.48
SYNPO2L-201ENST00000372873 CENPBP07199 599 aaPredicted RBP17.69■□□□□ 0.42
SYNPO2L-201ENST00000372873 ZEB1P37275 1124 aaPredicted RBP17.66■□□□□ 0.42
SYNPO2L-201ENST00000372873 SCAF1Q9H7N4 1312 aaKnown RBP17.43■□□□□ 0.38
SYNPO2L-201ENST00000372873 TRIM26Q12899 539 aaPredicted RBP17.38■□□□□ 0.37
SYNPO2L-201ENST00000372873 GTF3C3Q9Y5Q9 886 aa17.32■□□□□ 0.36
SYNPO2L-201ENST00000372873 YTHDC1Q96MU7 727 aaKnown RBP17.28■□□□□ 0.36
SYNPO2L-201ENST00000372873 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
SYNPO2L-201ENST00000372873 ACIN1Q9UKV3 1341 aaKnown RBP17.2■□□□□ 0.34
SYNPO2L-201ENST00000372873 CCER1Q8TC90 406 aaPredicted RBP17.19■□□□□ 0.34
SYNPO2L-201ENST00000372873 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
SYNPO2L-201ENST00000372873 LOC105371045A0A1W2PR82 267 aa17.12■□□□□ 0.33
SYNPO2L-201ENST00000372873 TTBK1Q5TCY1 1321 aaPredicted RBP17.07■□□□□ 0.32
SYNPO2L-201ENST00000372873 NEUROD1Q13562 356 aa17.02■□□□□ 0.32
SYNPO2L-201ENST00000372873 FAM9AQ8IZU1 332 aaPredicted RBP17.01■□□□□ 0.31
SYNPO2L-201ENST00000372873 DIEXFQ68CQ4 756 aaKnown RBP17■□□□□ 0.31
SYNPO2L-201ENST00000372873 ERICH6Q7L0X2 663 aa16.92■□□□□ 0.3
SYNPO2L-201ENST00000372873 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
SYNPO2L-201ENST00000372873 BCL11AQ9H165 835 aa16.71■□□□□ 0.27
SYNPO2L-201ENST00000372873 TRIM41Q8WV44 630 aa16.66■□□□□ 0.26
SYNPO2L-201ENST00000372873 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
SYNPO2L-201ENST00000372873 NEFLP07196 543 aa16.58■□□□□ 0.25
SYNPO2L-201ENST00000372873 MYO15BQ96JP2 1530 aa16.57■□□□□ 0.24
SYNPO2L-201ENST00000372873 ZCCHC6Q5VYS8 1495 aaKnown RBP16.53■□□□□ 0.24
SYNPO2L-201ENST00000372873 ANP32EQ9BTT0 268 aa16.52■□□□□ 0.24
SYNPO2L-201ENST00000372873 ZNF316A6NFI3 1004 aaPredicted RBP16.45■□□□□ 0.22
SYNPO2L-201ENST00000372873 BCANQ96GW7 911 aa16.45■□□□□ 0.22
SYNPO2L-201ENST00000372873 APLP2Q06481 763 aa16.33■□□□□ 0.2
SYNPO2L-201ENST00000372873 CCDC180Q9P1Z9 1646 aa16.32■□□□□ 0.2
SYNPO2L-201ENST00000372873 MIER1Q8N108 512 aa16.25■□□□□ 0.19
SYNPO2L-201ENST00000372873 CSRNP3Q8WYN3 585 aa16.24■□□□□ 0.19
SYNPO2L-201ENST00000372873 CLSPNQ9HAW4 1339 aa16.22■□□□□ 0.19
SYNPO2L-201ENST00000372873 ABCC9O60706 1549 aa16.21■□□□□ 0.19
SYNPO2L-201ENST00000372873 HNRNPUL2Q1KMD3 747 aaKnown RBP16.2■□□□□ 0.18
SYNPO2L-201ENST00000372873 RTL5Q5HYW3 569 aaPredicted RBP16.14■□□□□ 0.17
SYNPO2L-201ENST00000372873 RANGAP1P46060 587 aaPredicted RBP16.12■□□□□ 0.17
SYNPO2L-201ENST00000372873 UBTFP17480 764 aaKnown RBP16.09■□□□□ 0.17
SYNPO2L-201ENST00000372873 FKBP8Q14318 412 aa16.09■□□□□ 0.17
SYNPO2L-201ENST00000372873 SUPT16HQ9Y5B9 1047 aaKnown RBP16.08■□□□□ 0.17
SYNPO2L-201ENST00000372873 PRKCSHP14314 528 aaPredicted RBP16.07■□□□□ 0.16
SYNPO2L-201ENST00000372873 CDK11AQ9UQ88 783 aaPredicted RBP16.05■□□□□ 0.16
SYNPO2L-201ENST00000372873 TSHZ2Q9NRE2 1034 aa16.02■□□□□ 0.16
SYNPO2L-201ENST00000372873 SCRIBQ14160 1630 aa16.01■□□□□ 0.15
SYNPO2L-201ENST00000372873 EIF5BO60841 1220 aaKnown RBP16■□□□□ 0.15
SYNPO2L-201ENST00000372873 MYT1LQ9UL68 1186 aa15.99■□□□□ 0.15
SYNPO2L-201ENST00000372873 ITGAEP38570 1179 aa15.93■□□□□ 0.14
SYNPO2L-201ENST00000372873 NBR1Q14596 966 aa15.91■□□□□ 0.14
SYNPO2L-201ENST00000372873 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
SYNPO2L-201ENST00000372873 RBM19Q9Y4C8 960 aaKnown RBP15.85■□□□□ 0.13
SYNPO2L-201ENST00000372873 DEKP35659 375 aaKnown RBP15.79■□□□□ 0.12
SYNPO2L-201ENST00000372873 RSF1Q96T23 1441 aaPredicted RBP15.79■□□□□ 0.12
SYNPO2L-201ENST00000372873 RTN4Q9NQC3 1192 aaKnown RBP15.76■□□□□ 0.11
SYNPO2L-201ENST00000372873 DAXXQ9UER7 740 aaPredicted RBP15.74■□□□□ 0.11
SYNPO2L-201ENST00000372873 TRIM52Q96A61 297 aa15.72■□□□□ 0.11
SYNPO2L-201ENST00000372873 ANP32AP39687 249 aaKnown RBP15.7■□□□□ 0.1
SYNPO2L-201ENST00000372873 ANP32CO43423 234 aa15.69■□□□□ 0.1
SYNPO2L-201ENST00000372873 CCDC136Q96JN2 1154 aa15.65■□□□□ 0.1
SYNPO2L-201ENST00000372873 IRX6P78412 446 aaPredicted RBP15.64■□□□□ 0.09
SYNPO2L-201ENST00000372873 ANO8Q9HCE9 1232 aaPredicted RBP15.62■□□□□ 0.09
SYNPO2L-201ENST00000372873 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.62■□□□□ 0.09
SYNPO2L-201ENST00000372873 DDX10Q13206 875 aaKnown RBP15.61■□□□□ 0.09
SYNPO2L-201ENST00000372873 GLIPR1L2Q4G1C9 344 aa15.61■□□□□ 0.09
SYNPO2L-201ENST00000372873 CECR2Q9BXF3 1484 aa15.6■□□□□ 0.09
SYNPO2L-201ENST00000372873 ZBTB47Q9UFB7 747 aaPredicted RBP15.59■□□□□ 0.09
SYNPO2L-201ENST00000372873 NPM2Q86SE8 214 aaKnown RBP15.57■□□□□ 0.08
SYNPO2L-201ENST00000372873 HNRNPUQ00839 825 aaKnown RBP eCLIP15.53■□□□□ 0.08
SYNPO2L-201ENST00000372873 CNGB1Q14028 1251 aaPredicted RBP15.52■□□□□ 0.07
SYNPO2L-201ENST00000372873 NOP58Q9Y2X3 529 aaKnown RBP15.5■□□□□ 0.07
SYNPO2L-201ENST00000372873 RB1CC1Q8TDY2 1594 aa15.5■□□□□ 0.07
SYNPO2L-201ENST00000372873 ERICH6BQ5W0A0 696 aa15.46■□□□□ 0.07
SYNPO2L-201ENST00000372873 NACADO15069 1562 aa15.46■□□□□ 0.07
SYNPO2L-201ENST00000372873 ATP1B4Q9UN42 357 aaPredicted RBP15.45■□□□□ 0.06
SYNPO2L-201ENST00000372873 MROH2BQ7Z745 1585 aa15.42■□□□□ 0.06
SYNPO2L-201ENST00000372873 SALL2Q9Y467 1007 aaPredicted RBP15.42■□□□□ 0.06
SYNPO2L-201ENST00000372873 NEFMP07197 916 aa15.37■□□□□ 0.05
SYNPO2L-201ENST00000372873 POLR3GLQ9BT43 218 aa15.35■□□□□ 0.05
SYNPO2L-201ENST00000372873 FANCIQ9NVI1 1328 aa15.35■□□□□ 0.05
SYNPO2L-201ENST00000372873 HIRIP3Q9BW71 556 aaPredicted RBP15.35■□□□□ 0.05
SYNPO2L-201ENST00000372873 KCNH8Q96L42 1107 aa15.34■□□□□ 0.05
SYNPO2L-201ENST00000372873 LAS1LQ9Y4W2 734 aaKnown RBP15.32■□□□□ 0.04
SYNPO2L-201ENST00000372873 B4GALNT3Q6L9W6 998 aa15.31■□□□□ 0.04
SYNPO2L-201ENST00000372873 PPP4R2Q9NY27 417 aa15.31■□□□□ 0.04
SYNPO2L-201ENST00000372873 SLC24A1O60721 1099 aa15.29■□□□□ 0.04
SYNPO2L-201ENST00000372873 FAM9BQ8IZU0 186 aa15.28■□□□□ 0.04
SYNPO2L-201ENST00000372873 MSH5O43196 834 aa15.27■□□□□ 0.03
SYNPO2L-201ENST00000372873 WIZO95785 1651 aa15.26■□□□□ 0.03
SYNPO2L-201ENST00000372873 BAZ1AQ9NRL2 1556 aaPredicted RBP15.24■□□□□ 0.03
SYNPO2L-201ENST00000372873 IL27Q8NEV9 243 aa15.22■□□□□ 0.03
SYNPO2L-201ENST00000372873 FAM50AQ14320 339 aaKnown RBP15.22■□□□□ 0.03
SYNPO2L-201ENST00000372873 CEP162Q5TB80 1403 aa15.21■□□□□ 0.03
SYNPO2L-201ENST00000372873 PPM1GO15355 546 aaPredicted RBP15.2■□□□□ 0.02
SYNPO2L-201ENST00000372873 ARXQ96QS3 562 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms