RNA–Protein interactions for RNA: ENST00000507365.1

LINC02172-201, Transcript of long intergenic non-protein coding RNA 2172, humanhuman

TSL 4 BASIC

Gene LINC02172, Length 2,264 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02172-201ENST00000507365 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
LINC02172-201ENST00000507365 CCDC180Q9P1Z9 1646 aa21.83■■□□□ 1.09
LINC02172-201ENST00000507365 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.95
LINC02172-201ENST00000507365 DCAF8L2P0C7V8 631 aa20.94■□□□□ 0.94
LINC02172-201ENST00000507365 ABCC9O60706 1549 aa20.9■□□□□ 0.94
LINC02172-201ENST00000507365 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
LINC02172-201ENST00000507365 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
LINC02172-201ENST00000507365 MYO15BQ96JP2 1530 aa20.4■□□□□ 0.86
LINC02172-201ENST00000507365 NACADO15069 1562 aa20.38■□□□□ 0.85
LINC02172-201ENST00000507365 RB1CC1Q8TDY2 1594 aa20.27■□□□□ 0.83
LINC02172-201ENST00000507365 SCRIBQ14160 1630 aa20.21■□□□□ 0.83
LINC02172-201ENST00000507365 UNC13AQ9UPW8 1703 aa19.86■□□□□ 0.77
LINC02172-201ENST00000507365 PABPN1Q86U42 306 aaKnown RBP eCLIP19.73■□□□□ 0.75
LINC02172-201ENST00000507365 SUPT5HO00267 1087 aaKnown RBP19.72■□□□□ 0.75
LINC02172-201ENST00000507365 BICRAQ9NZM4 1560 aa19.64■□□□□ 0.74
LINC02172-201ENST00000507365 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
LINC02172-201ENST00000507365 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
LINC02172-201ENST00000507365 MROH2BQ7Z745 1585 aa19.39■□□□□ 0.69
LINC02172-201ENST00000507365 BAZ1AQ9NRL2 1556 aaPredicted RBP19.36■□□□□ 0.69
LINC02172-201ENST00000507365 SMARCA4P51532 1647 aa19.29■□□□□ 0.68
LINC02172-201ENST00000507365 WIZO95785 1651 aa19.24■□□□□ 0.67
LINC02172-201ENST00000507365 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
LINC02172-201ENST00000507365 ATAD2BQ9ULI0 1458 aa19■□□□□ 0.63
LINC02172-201ENST00000507365 PEG3Q9GZU2 1588 aa18.99■□□□□ 0.63
LINC02172-201ENST00000507365 TOP2AP11388 1531 aaKnown RBP18.99■□□□□ 0.63
LINC02172-201ENST00000507365 SMARCA2P51531 1590 aa18.97■□□□□ 0.63
LINC02172-201ENST00000507365 SLC24A1O60721 1099 aa18.95■□□□□ 0.62
LINC02172-201ENST00000507365 BAZ1BQ9UIG0 1483 aaKnown RBP18.92■□□□□ 0.62
LINC02172-201ENST00000507365 CC2D2AQ9P2K1 1620 aa18.86■□□□□ 0.61
LINC02172-201ENST00000507365 CCDC88BA6NC98 1476 aa18.83■□□□□ 0.6
LINC02172-201ENST00000507365 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
LINC02172-201ENST00000507365 HMGXB3Q12766 1538 aa18.78■□□□□ 0.6
LINC02172-201ENST00000507365 CHIC1Q5VXU3 224 aa18.72■□□□□ 0.59
LINC02172-201ENST00000507365 MYT1Q01538 1121 aa18.53■□□□□ 0.56
LINC02172-201ENST00000507365 DNAJC5BQ9UF47 199 aa18.52■□□□□ 0.55
LINC02172-201ENST00000507365 TRIM41Q8WV44 630 aa18.49■□□□□ 0.55
LINC02172-201ENST00000507365 ABCC8Q09428 1581 aa18.45■□□□□ 0.54
LINC02172-201ENST00000507365 CFTRP13569 1480 aa18.39■□□□□ 0.54
LINC02172-201ENST00000507365 PELP1Q8IZL8 1130 aaKnown RBP18.38■□□□□ 0.53
LINC02172-201ENST00000507365 CADPSQ9ULU8 1353 aa18.37■□□□□ 0.53
LINC02172-201ENST00000507365 NESP48681 1621 aa18.31■□□□□ 0.52
LINC02172-201ENST00000507365 WRNQ14191 1432 aaPredicted RBP eCLIP18.3■□□□□ 0.52
LINC02172-201ENST00000507365 PRDM2Q13029 1718 aa18.26■□□□□ 0.51
LINC02172-201ENST00000507365 FAM9AQ8IZU1 332 aaPredicted RBP18.24■□□□□ 0.51
LINC02172-201ENST00000507365 SYNJ1O43426 1573 aa18.23■□□□□ 0.51
LINC02172-201ENST00000507365 TTBK1Q5TCY1 1321 aaPredicted RBP18.22■□□□□ 0.51
LINC02172-201ENST00000507365 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
LINC02172-201ENST00000507365 FANCD2Q9BXW9 1451 aa18.2■□□□□ 0.5
LINC02172-201ENST00000507365 CUX1P39880 1505 aa18.13■□□□□ 0.49
LINC02172-201ENST00000507365 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
LINC02172-201ENST00000507365 PDS5BQ9NTI5 1447 aa18.1■□□□□ 0.49
LINC02172-201ENST00000507365 CEP164Q9UPV0 1460 aa18.09■□□□□ 0.49
LINC02172-201ENST00000507365 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
LINC02172-201ENST00000507365 LOC105371045A0A1W2PR82 267 aa18.07■□□□□ 0.48
LINC02172-201ENST00000507365 SOGA1O94964 1423 aa18.07■□□□□ 0.48
LINC02172-201ENST00000507365 EHMT2Q96KQ7 1210 aa18.06■□□□□ 0.48
LINC02172-201ENST00000507365 KIF21AQ7Z4S6 1674 aa18.04■□□□□ 0.48
LINC02172-201ENST00000507365 RUSC2Q8N2Y8 1516 aa18.01■□□□□ 0.47
LINC02172-201ENST00000507365 DNMBPQ6XZF7 1577 aa17.97■□□□□ 0.47
LINC02172-201ENST00000507365 TOPBP1Q92547 1522 aa17.97■□□□□ 0.47
LINC02172-201ENST00000507365 FGD5Q6ZNL6 1462 aa17.97■□□□□ 0.47
LINC02172-201ENST00000507365 URB2Q14146 1524 aaKnown RBP17.96■□□□□ 0.47
LINC02172-201ENST00000507365 ERCC6Q03468 1493 aa17.94■□□□□ 0.46
LINC02172-201ENST00000507365 EEA1Q15075 1411 aa17.93■□□□□ 0.46
LINC02172-201ENST00000507365 CSRNP3Q8WYN3 585 aa17.91■□□□□ 0.46
LINC02172-201ENST00000507365 POLA1P09884 1462 aaPredicted RBP17.89■□□□□ 0.45
LINC02172-201ENST00000507365 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
LINC02172-201ENST00000507365 RAD54L2Q9Y4B4 1467 aa17.86■□□□□ 0.45
LINC02172-201ENST00000507365 CUX2O14529 1486 aa17.85■□□□□ 0.45
LINC02172-201ENST00000507365 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
LINC02172-201ENST00000507365 WDR62O43379 1518 aa17.76■□□□□ 0.43
LINC02172-201ENST00000507365 ABCA10Q8WWZ4 1543 aa17.76■□□□□ 0.43
LINC02172-201ENST00000507365 UBTFP17480 764 aaKnown RBP17.75■□□□□ 0.43
LINC02172-201ENST00000507365 THOC2Q8NI27 1593 aaKnown RBP17.74■□□□□ 0.43
LINC02172-201ENST00000507365 GOLGA3Q08378 1498 aa17.73■□□□□ 0.43
LINC02172-201ENST00000507365 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
LINC02172-201ENST00000507365 PRKCSHP14314 528 aaPredicted RBP17.71■□□□□ 0.43
LINC02172-201ENST00000507365 KIF21BO75037 1637 aa17.71■□□□□ 0.43
LINC02172-201ENST00000507365 RAPGEF2Q9Y4G8 1499 aa17.7■□□□□ 0.42
LINC02172-201ENST00000507365 DAXXQ9UER7 740 aaPredicted RBP17.7■□□□□ 0.42
LINC02172-201ENST00000507365 WDR97A6NE52 1622 aa17.69■□□□□ 0.42
LINC02172-201ENST00000507365 IGF1RP08069 1367 aa17.68■□□□□ 0.42
LINC02172-201ENST00000507365 TARBP1Q13395 1621 aaKnown RBP17.68■□□□□ 0.42
LINC02172-201ENST00000507365 PRXQ9BXM0 1461 aa17.66■□□□□ 0.42
LINC02172-201ENST00000507365 GAPVD1Q14C86 1478 aa17.63■□□□□ 0.41
LINC02172-201ENST00000507365 APLP2Q06481 763 aa17.63■□□□□ 0.41
LINC02172-201ENST00000507365 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
LINC02172-201ENST00000507365 TNIKQ9UKE5 1360 aa17.63■□□□□ 0.41
LINC02172-201ENST00000507365 ABCA5Q8WWZ7 1642 aa17.62■□□□□ 0.41
LINC02172-201ENST00000507365 CARMIL1Q5VZK9 1371 aa17.61■□□□□ 0.41
LINC02172-201ENST00000507365 AQRO60306 1485 aaKnown RBP eCLIP17.61■□□□□ 0.41
LINC02172-201ENST00000507365 ERICH3Q5RHP9 1530 aa17.6■□□□□ 0.41
LINC02172-201ENST00000507365 ZNF608Q9ULD9 1512 aaPredicted RBP17.6■□□□□ 0.41
LINC02172-201ENST00000507365 RANGAP1P46060 587 aaPredicted RBP17.6■□□□□ 0.41
LINC02172-201ENST00000507365 ERICH6Q7L0X2 663 aa17.59■□□□□ 0.41
LINC02172-201ENST00000507365 CEP162Q5TB80 1403 aa17.59■□□□□ 0.41
LINC02172-201ENST00000507365 CUL7Q14999 1698 aa17.53■□□□□ 0.4
LINC02172-201ENST00000507365 PBRM1Q86U86 1689 aa17.52■□□□□ 0.39
LINC02172-201ENST00000507365 EIF4G3O43432 1585 aaKnown RBP17.51■□□□□ 0.39
LINC02172-201ENST00000507365 GRIN2BQ13224 1484 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms