RNA–Protein interactions for RNA: ENST00000556663.5

GPATCH2L-209, Transcript of G-patch domain containing 2 like, humanhuman

TSL 2 BASIC

Gene GPATCH2L, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH2L-209ENST00000556663 NISCHQ9Y2I1 1504 aa23.86■■□□□ 1.41
GPATCH2L-209ENST00000556663 CCDC180Q9P1Z9 1646 aa21.38■■□□□ 1.01
GPATCH2L-209ENST00000556663 ABCC9O60706 1549 aa21.02■□□□□ 0.96
GPATCH2L-209ENST00000556663 HRCP23327 699 aa20.41■□□□□ 0.86
GPATCH2L-209ENST00000556663 RB1CC1Q8TDY2 1594 aa20.23■□□□□ 0.83
GPATCH2L-209ENST00000556663 NACADO15069 1562 aa20.16■□□□□ 0.82
GPATCH2L-209ENST00000556663 MYO15BQ96JP2 1530 aa20.02■□□□□ 0.79
GPATCH2L-209ENST00000556663 PELP1Q8IZL8 1130 aaKnown RBP19.95■□□□□ 0.78
GPATCH2L-209ENST00000556663 DCAF8L2P0C7V8 631 aa19.93■□□□□ 0.78
GPATCH2L-209ENST00000556663 SHROOM4Q9ULL8 1493 aa19.91■□□□□ 0.78
GPATCH2L-209ENST00000556663 SUPT5HO00267 1087 aaKnown RBP19.86■□□□□ 0.77
GPATCH2L-209ENST00000556663 DCAF1Q9Y4B6 1507 aa19.84■□□□□ 0.77
GPATCH2L-209ENST00000556663 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
GPATCH2L-209ENST00000556663 CHIC1Q5VXU3 224 aa19.79■□□□□ 0.76
GPATCH2L-209ENST00000556663 PCGF6Q9BYE7 350 aa19.75■□□□□ 0.75
GPATCH2L-209ENST00000556663 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
GPATCH2L-209ENST00000556663 PPARGC1BQ86YN6 1023 aaKnown RBP19.59■□□□□ 0.73
GPATCH2L-209ENST00000556663 PABPN1Q86U42 306 aaKnown RBP eCLIP19.57■□□□□ 0.72
GPATCH2L-209ENST00000556663 BICRAQ9NZM4 1560 aa19.54■□□□□ 0.72
GPATCH2L-209ENST00000556663 DNAJC5BQ9UF47 199 aa19.45■□□□□ 0.7
GPATCH2L-209ENST00000556663 ZEB1P37275 1124 aaPredicted RBP19.44■□□□□ 0.7
GPATCH2L-209ENST00000556663 TRIM26Q12899 539 aaPredicted RBP19.41■□□□□ 0.7
GPATCH2L-209ENST00000556663 SCRIBQ14160 1630 aa19.37■□□□□ 0.69
GPATCH2L-209ENST00000556663 MYT1Q01538 1121 aa19.3■□□□□ 0.68
GPATCH2L-209ENST00000556663 SCAF1Q9H7N4 1312 aaKnown RBP19.12■□□□□ 0.65
GPATCH2L-209ENST00000556663 EIF4G1Q04637 1599 aaKnown RBP19.07■□□□□ 0.64
GPATCH2L-209ENST00000556663 LOC105371045A0A1W2PR82 267 aa19.05■□□□□ 0.64
GPATCH2L-209ENST00000556663 CC2D2AQ9P2K1 1620 aa19.03■□□□□ 0.64
GPATCH2L-209ENST00000556663 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
GPATCH2L-209ENST00000556663 ACIN1Q9UKV3 1341 aaKnown RBP18.81■□□□□ 0.6
GPATCH2L-209ENST00000556663 CENPBP07199 599 aaPredicted RBP18.68■□□□□ 0.58
GPATCH2L-209ENST00000556663 NEUROD1Q13562 356 aa18.6■□□□□ 0.57
GPATCH2L-209ENST00000556663 NCAPD3P42695 1498 aa18.59■□□□□ 0.57
GPATCH2L-209ENST00000556663 TRIM41Q8WV44 630 aa18.58■□□□□ 0.57
GPATCH2L-209ENST00000556663 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
GPATCH2L-209ENST00000556663 RSF1Q96T23 1441 aaPredicted RBP18.55■□□□□ 0.56
GPATCH2L-209ENST00000556663 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
GPATCH2L-209ENST00000556663 BAZ1AQ9NRL2 1556 aaPredicted RBP18.54■□□□□ 0.56
GPATCH2L-209ENST00000556663 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.55
GPATCH2L-209ENST00000556663 GTF3C3Q9Y5Q9 886 aa18.51■□□□□ 0.55
GPATCH2L-209ENST00000556663 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
GPATCH2L-209ENST00000556663 DIEXFQ68CQ4 756 aaKnown RBP18.45■□□□□ 0.54
GPATCH2L-209ENST00000556663 PEG3Q9GZU2 1588 aa18.43■□□□□ 0.54
GPATCH2L-209ENST00000556663 CCER1Q8TC90 406 aaPredicted RBP18.39■□□□□ 0.53
GPATCH2L-209ENST00000556663 BAZ1BQ9UIG0 1483 aaKnown RBP18.37■□□□□ 0.53
GPATCH2L-209ENST00000556663 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
GPATCH2L-209ENST00000556663 MROH2BQ7Z745 1585 aa18.32■□□□□ 0.52
GPATCH2L-209ENST00000556663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.29■□□□□ 0.52
GPATCH2L-209ENST00000556663 FAM9AQ8IZU1 332 aaPredicted RBP18.25■□□□□ 0.51
GPATCH2L-209ENST00000556663 ERCC6Q03468 1493 aa18.2■□□□□ 0.5
GPATCH2L-209ENST00000556663 ZNF316A6NFI3 1004 aaPredicted RBP18.18■□□□□ 0.5
GPATCH2L-209ENST00000556663 CLSPNQ9HAW4 1339 aa18.18■□□□□ 0.5
GPATCH2L-209ENST00000556663 TTBK1Q5TCY1 1321 aaPredicted RBP18.17■□□□□ 0.5
GPATCH2L-209ENST00000556663 CUX2O14529 1486 aa18.16■□□□□ 0.5
GPATCH2L-209ENST00000556663 LAMC3Q9Y6N6 1575 aa18.14■□□□□ 0.49
GPATCH2L-209ENST00000556663 WIZO95785 1651 aa18.1■□□□□ 0.49
GPATCH2L-209ENST00000556663 NESP48681 1621 aa18.09■□□□□ 0.49
GPATCH2L-209ENST00000556663 PDS5BQ9NTI5 1447 aa18.04■□□□□ 0.48
GPATCH2L-209ENST00000556663 CADPSQ9ULU8 1353 aa18.02■□□□□ 0.47
GPATCH2L-209ENST00000556663 CEP162Q5TB80 1403 aa18.01■□□□□ 0.47
GPATCH2L-209ENST00000556663 TNIKQ9UKE5 1360 aa17.99■□□□□ 0.47
GPATCH2L-209ENST00000556663 EEA1Q15075 1411 aa17.98■□□□□ 0.47
GPATCH2L-209ENST00000556663 TOP2AP11388 1531 aaKnown RBP17.98■□□□□ 0.47
GPATCH2L-209ENST00000556663 THOC2Q8NI27 1593 aaKnown RBP17.94■□□□□ 0.46
GPATCH2L-209ENST00000556663 EHMT2Q96KQ7 1210 aa17.92■□□□□ 0.46
GPATCH2L-209ENST00000556663 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
GPATCH2L-209ENST00000556663 MIER1Q8N108 512 aa17.89■□□□□ 0.45
GPATCH2L-209ENST00000556663 YTHDC1Q96MU7 727 aaKnown RBP17.87■□□□□ 0.45
GPATCH2L-209ENST00000556663 CFTRP13569 1480 aa17.86■□□□□ 0.45
GPATCH2L-209ENST00000556663 MRC2Q9UBG0 1479 aa17.84■□□□□ 0.45
GPATCH2L-209ENST00000556663 DNAJC5Q9H3Z4 198 aa17.83■□□□□ 0.44
GPATCH2L-209ENST00000556663 CEP164Q9UPV0 1460 aa17.81■□□□□ 0.44
GPATCH2L-209ENST00000556663 GOLGA3Q08378 1498 aa17.78■□□□□ 0.44
GPATCH2L-209ENST00000556663 FANCD2Q9BXW9 1451 aa17.78■□□□□ 0.44
GPATCH2L-209ENST00000556663 WDR62O43379 1518 aa17.78■□□□□ 0.44
GPATCH2L-209ENST00000556663 CCDC88BA6NC98 1476 aa17.77■□□□□ 0.44
GPATCH2L-209ENST00000556663 ANP32EQ9BTT0 268 aa17.75■□□□□ 0.43
GPATCH2L-209ENST00000556663 SUPT16HQ9Y5B9 1047 aaKnown RBP17.72■□□□□ 0.43
GPATCH2L-209ENST00000556663 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
GPATCH2L-209ENST00000556663 PRDM2Q13029 1718 aa17.71■□□□□ 0.43
GPATCH2L-209ENST00000556663 KIF21BO75037 1637 aa17.68■□□□□ 0.42
GPATCH2L-209ENST00000556663 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
GPATCH2L-209ENST00000556663 SOGA1O94964 1423 aa17.66■□□□□ 0.42
GPATCH2L-209ENST00000556663 TSHZ2Q9NRE2 1034 aa17.62■□□□□ 0.41
GPATCH2L-209ENST00000556663 VPS8Q8N3P4 1428 aa17.6■□□□□ 0.41
GPATCH2L-209ENST00000556663 URB2Q14146 1524 aaKnown RBP17.59■□□□□ 0.41
GPATCH2L-209ENST00000556663 BCL11AQ9H165 835 aa17.57■□□□□ 0.4
GPATCH2L-209ENST00000556663 UBTFP17480 764 aaKnown RBP17.56■□□□□ 0.4
GPATCH2L-209ENST00000556663 CLIP1P30622 1438 aa17.52■□□□□ 0.4
GPATCH2L-209ENST00000556663 RUSC2Q8N2Y8 1516 aa17.5■□□□□ 0.39
GPATCH2L-209ENST00000556663 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
GPATCH2L-209ENST00000556663 DHX57Q6P158 1386 aaKnown RBP17.48■□□□□ 0.39
GPATCH2L-209ENST00000556663 IFT140Q96RY7 1462 aa17.47■□□□□ 0.39
GPATCH2L-209ENST00000556663 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
GPATCH2L-209ENST00000556663 DNMBPQ6XZF7 1577 aa17.46■□□□□ 0.39
GPATCH2L-209ENST00000556663 APLP2Q06481 763 aa17.42■□□□□ 0.38
GPATCH2L-209ENST00000556663 RRBP1Q9P2E9 1410 aaKnown RBP17.33■□□□□ 0.36
GPATCH2L-209ENST00000556663 SYNJ1O43426 1573 aa17.33■□□□□ 0.36
GPATCH2L-209ENST00000556663 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
GPATCH2L-209ENST00000556663 ZNF608Q9ULD9 1512 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms