Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
ARCN1P48444 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARCN1P48444 MIR770-201ENST00000390219 98 ntBASIC15.82■□□□□ 0.12
ARCN1P48444 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.82■□□□□ 0.12
ARCN1P48444 SPDYE7P-202ENST00000420373 878 ntBASIC15.82■□□□□ 0.12
ARCN1P48444 KLF2P3-201ENST00000451977 1087 ntBASIC15.82■□□□□ 0.12
ARCN1P48444 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ARCN1P48444 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.82■□□□□ 0.12
ARCN1P48444 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.82■□□□□ 0.12
ARCN1P48444 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.82■□□□□ 0.12
ARCN1P48444 AC005498.2-205ENST00000593218 784 ntBASIC15.82■□□□□ 0.12
ARCN1P48444 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.82■□□□□ 0.12
ARCN1P48444 KRT8P12-202ENST00000472924 1397 ntBASIC15.82■□□□□ 0.12
ARCN1P48444 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ARCN1P48444 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARCN1P48444 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARCN1P48444 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ARCN1P48444 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ARCN1P48444 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ARCN1P48444 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARCN1P48444 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.82■□□□□ 0.12
ARCN1P48444 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ARCN1P48444 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.82■□□□□ 0.12
ARCN1P48444 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.82■□□□□ 0.12
ARCN1P48444 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.82■□□□□ 0.12
ARCN1P48444 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ARCN1P48444 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ARCN1P48444 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.82■□□□□ 0.12
ARCN1P48444 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.82■□□□□ 0.12
ARCN1P48444 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARCN1P48444 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ARCN1P48444 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ARCN1P48444 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ARCN1P48444 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ARCN1P48444 AL136379.1-201ENST00000623471 2642 ntBASIC15.81■□□□□ 0.12
ARCN1P48444 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ARCN1P48444 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ARCN1P48444 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.81■□□□□ 0.12
ARCN1P48444 MIR943-201ENST00000401286 94 ntBASIC15.81■□□□□ 0.12
ARCN1P48444 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.81■□□□□ 0.12
ARCN1P48444 TREML5P-201ENST00000421694 576 ntBASIC15.81■□□□□ 0.12
ARCN1P48444 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.81■□□□□ 0.12
ARCN1P48444 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.81■□□□□ 0.12
ARCN1P48444 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.81■□□□□ 0.12
ARCN1P48444 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.81■□□□□ 0.12
ARCN1P48444 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ARCN1P48444 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.81■□□□□ 0.12
ARCN1P48444 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.81■□□□□ 0.12
ARCN1P48444 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.81■□□□□ 0.12
ARCN1P48444 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.81■□□□□ 0.12
ARCN1P48444 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.81■□□□□ 0.12
ARCN1P48444 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.81■□□□□ 0.12
ARCN1P48444 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.81■□□□□ 0.12
ARCN1P48444 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.81■□□□□ 0.12
ARCN1P48444 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ARCN1P48444 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.81■□□□□ 0.12
ARCN1P48444 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.81■□□□□ 0.12
ARCN1P48444 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.81■□□□□ 0.12
ARCN1P48444 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ARCN1P48444 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ARCN1P48444 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.81■□□□□ 0.12
ARCN1P48444 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.8■□□□□ 0.12
ARCN1P48444 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARCN1P48444 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARCN1P48444 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ARCN1P48444 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ARCN1P48444 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ARCN1P48444 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARCN1P48444 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARCN1P48444 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.8■□□□□ 0.12
ARCN1P48444 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
ARCN1P48444 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
ARCN1P48444 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARCN1P48444 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARCN1P48444 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.8■□□□□ 0.12
ARCN1P48444 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ARCN1P48444 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.8■□□□□ 0.12
ARCN1P48444 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.8■□□□□ 0.12
ARCN1P48444 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARCN1P48444 KRT8P44-201ENST00000441609 1350 ntBASIC15.8■□□□□ 0.12
ARCN1P48444 FO538757.1-201ENST00000623083 1397 ntBASIC15.8■□□□□ 0.12
ARCN1P48444 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.8■□□□□ 0.12
ARCN1P48444 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms