Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.48■□□□□ 0.39
TPM1P09493 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TPM1P09493 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM1P09493 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.48■□□□□ 0.39
TPM1P09493 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM1P09493 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.48■□□□□ 0.39
TPM1P09493 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM1P09493 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM1P09493 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TPM1P09493 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.48■□□□□ 0.39
TPM1P09493 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TPM1P09493 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM1P09493 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.48■□□□□ 0.39
TPM1P09493 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM1P09493 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM1P09493 C18orf15-201ENST00000623680 2534 ntBASIC17.48■□□□□ 0.39
TPM1P09493 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM1P09493 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.48■□□□□ 0.39
TPM1P09493 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TPM1P09493 LINC00528-201ENST00000600723 2160 ntBASIC17.47■□□□□ 0.39
TPM1P09493 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.47■□□□□ 0.39
TPM1P09493 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
TPM1P09493 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TPM1P09493 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM1P09493 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.47■□□□□ 0.39
TPM1P09493 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TPM1P09493 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM1P09493 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.47■□□□□ 0.39
TPM1P09493 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
TPM1P09493 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.47■□□□□ 0.39
TPM1P09493 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM1P09493 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.47■□□□□ 0.39
TPM1P09493 CRYGEP-201ENST00000412192 528 ntBASIC17.47■□□□□ 0.39
TPM1P09493 AC092474.2-201ENST00000424288 719 ntBASIC17.47■□□□□ 0.39
TPM1P09493 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM1P09493 KRT18P67-201ENST00000432816 1264 ntBASIC17.47■□□□□ 0.39
TPM1P09493 VN2R19P-201ENST00000442399 1052 ntBASIC17.47■□□□□ 0.39
TPM1P09493 PRYP6-201ENST00000514804 343 ntBASIC17.47■□□□□ 0.39
TPM1P09493 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.47■□□□□ 0.39
TPM1P09493 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM1P09493 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 AC243562.2-201ENST00000561247 970 ntBASIC17.47■□□□□ 0.39
TPM1P09493 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.47■□□□□ 0.39
TPM1P09493 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TPM1P09493 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM1P09493 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TPM1P09493 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
TPM1P09493 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM1P09493 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM1P09493 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM1P09493 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM1P09493 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TPM1P09493 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM1P09493 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TPM1P09493 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM1P09493 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM1P09493 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.46■□□□□ 0.39
TPM1P09493 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.46■□□□□ 0.39
TPM1P09493 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM1P09493 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.46■□□□□ 0.39
TPM1P09493 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM1P09493 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM1P09493 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.46■□□□□ 0.39
TPM1P09493 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.46■□□□□ 0.39
TPM1P09493 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.46■□□□□ 0.39
TPM1P09493 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.46■□□□□ 0.39
TPM1P09493 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.46■□□□□ 0.39
TPM1P09493 HNRNPDP1-201ENST00000439535 754 ntBASIC17.46■□□□□ 0.39
TPM1P09493 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM1P09493 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.46■□□□□ 0.39
TPM1P09493 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.46■□□□□ 0.39
TPM1P09493 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TPM1P09493 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TPM1P09493 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TPM1P09493 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM1P09493 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM1P09493 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM1P09493 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.46■□□□□ 0.39
TPM1P09493 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM1P09493 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM1P09493 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM1P09493 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TPM1P09493 AC112693.3-201ENST00000624819 1983 ntBASIC17.46■□□□□ 0.39
TPM1P09493 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms