Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.89□□□□□ -0.19
C12orf4Q9NQ89 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 RPS15P9-201ENST00000494093 319 ntBASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 REXO1L6P-202ENST00000619970 1078 ntBASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 AP005117.1-202ENST00000581724 1908 ntBASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C12orf4Q9NQ89 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 CDC14C-201ENST00000428251 1719 ntBASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 AC027601.5-201ENST00000624065 2482 ntBASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 KRT18P35-201ENST00000510488 1269 ntBASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 LINC01711-201ENST00000598340 967 ntBASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.87□□□□□ -0.19
C12orf4Q9NQ89 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms