Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.11□□□□□ -0.15
ERCC1P07992 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.11□□□□□ -0.15
ERCC1P07992 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 MIR770-201ENST00000390219 98 ntBASIC14.11□□□□□ -0.15
ERCC1P07992 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.11□□□□□ -0.15
ERCC1P07992 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.11□□□□□ -0.15
ERCC1P07992 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.11□□□□□ -0.15
ERCC1P07992 AC105233.2-201ENST00000523697 349 ntBASIC14.11□□□□□ -0.15
ERCC1P07992 AF228730.5-201ENST00000530288 346 ntBASIC14.11□□□□□ -0.15
ERCC1P07992 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ERCC1P07992 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 AP001059.3-201ENST00000619053 235 ntBASIC14.11□□□□□ -0.15
ERCC1P07992 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.11□□□□□ -0.15
ERCC1P07992 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ERCC1P07992 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ERCC1P07992 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.11□□□□□ -0.15
ERCC1P07992 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ERCC1P07992 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ERCC1P07992 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ERCC1P07992 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ERCC1P07992 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 LINC02228-204ENST00000642115 2962 ntBASIC14.1□□□□□ -0.15
ERCC1P07992 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
ERCC1P07992 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.1□□□□□ -0.15
ERCC1P07992 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
ERCC1P07992 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.1□□□□□ -0.15
ERCC1P07992 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.1□□□□□ -0.15
ERCC1P07992 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 HAUS4P1-201ENST00000406739 1145 ntBASIC14.1□□□□□ -0.15
ERCC1P07992 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ERCC1P07992 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.1□□□□□ -0.15
ERCC1P07992 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.1□□□□□ -0.15
ERCC1P07992 RNA5SP421-201ENST00000516864 134 ntBASIC14.1□□□□□ -0.15
ERCC1P07992 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ERCC1P07992 AL512356.2-201ENST00000546955 174 ntBASIC14.1□□□□□ -0.15
ERCC1P07992 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.1□□□□□ -0.15
ERCC1P07992 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.1□□□□□ -0.15
ERCC1P07992 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.1□□□□□ -0.15
ERCC1P07992 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.1□□□□□ -0.15
ERCC1P07992 AC015911.4-201ENST00000588022 1070 ntBASIC14.1□□□□□ -0.15
ERCC1P07992 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.1□□□□□ -0.15
ERCC1P07992 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.1□□□□□ -0.15
ERCC1P07992 AC099063.4-201ENST00000641099 1602 ntBASIC14.1□□□□□ -0.15
ERCC1P07992 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.1□□□□□ -0.15
ERCC1P07992 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.1□□□□□ -0.15
ERCC1P07992 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ERCC1P07992 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
ERCC1P07992 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.1□□□□□ -0.15
ERCC1P07992 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
ERCC1P07992 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.1□□□□□ -0.15
ERCC1P07992 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERCC1P07992 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ERCC1P07992 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ERCC1P07992 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
ERCC1P07992 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ERCC1P07992 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERCC1P07992 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERCC1P07992 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ERCC1P07992 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ERCC1P07992 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERCC1P07992 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms