Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 CYP4F24P-201ENST00000586049 1580 ntBASIC15.41■□□□□ 0.06
PCDHGA11Q9Y5H2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 FLJ16779-201ENST00000612722 7638 ntBASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 AL353705.2-201ENST00000428243 662 ntBASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 AC063926.3-201ENST00000624734 5658 ntBASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 NORAD-201ENST00000565493 5339 ntBASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA11Q9Y5H2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 SSR4P1-203ENST00000599569 2260 ntBASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 KRT8P37-201ENST00000451609 1420 ntBASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms