Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.12■□□□□ 0.01
DUX1O43812 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.12■□□□□ 0.01
DUX1O43812 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
DUX1O43812 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.12■□□□□ 0.01
DUX1O43812 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
DUX1O43812 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX1O43812 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DUX1O43812 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DUX1O43812 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX1O43812 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX1O43812 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
DUX1O43812 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DUX1O43812 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.11■□□□□ 0.01
DUX1O43812 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX1O43812 AL133267.1-201ENST00000398220 340 ntBASIC15.11■□□□□ 0.01
DUX1O43812 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.11■□□□□ 0.01
DUX1O43812 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.11■□□□□ 0.01
DUX1O43812 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.11■□□□□ 0.01
DUX1O43812 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.11■□□□□ 0.01
DUX1O43812 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.11■□□□□ 0.01
DUX1O43812 AP005482.1-201ENST00000563722 1273 ntBASIC15.11■□□□□ 0.01
DUX1O43812 MIR4259-201ENST00000584466 101 ntBASIC15.11■□□□□ 0.01
DUX1O43812 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.11■□□□□ 0.01
DUX1O43812 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.11■□□□□ 0.01
DUX1O43812 AL022328.1-201ENST00000610050 478 ntBASIC15.11■□□□□ 0.01
DUX1O43812 AC133552.6-201ENST00000613406 534 ntBASIC15.11■□□□□ 0.01
DUX1O43812 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.11■□□□□ 0.01
DUX1O43812 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
DUX1O43812 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.11■□□□□ 0.01
DUX1O43812 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX1O43812 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.11■□□□□ 0.01
DUX1O43812 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX1O43812 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.11■□□□□ 0.01
DUX1O43812 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX1O43812 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX1O43812 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
DUX1O43812 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX1O43812 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX1O43812 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.1■□□□□ 0.01
DUX1O43812 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX1O43812 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.1■□□□□ 0.01
DUX1O43812 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX1O43812 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
DUX1O43812 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX1O43812 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DUX1O43812 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
DUX1O43812 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX1O43812 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
DUX1O43812 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.1■□□□□ 0.01
DUX1O43812 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.1■□□□□ 0.01
DUX1O43812 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DUX1O43812 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.1■□□□□ 0.01
DUX1O43812 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.1■□□□□ 0.01
DUX1O43812 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.1■□□□□ 0.01
DUX1O43812 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DUX1O43812 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.1■□□□□ 0.01
DUX1O43812 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
DUX1O43812 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
DUX1O43812 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.1■□□□□ 0.01
DUX1O43812 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.1■□□□□ 0.01
DUX1O43812 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.1■□□□□ 0.01
DUX1O43812 SLC25A47P1-201ENST00000531577 414 ntBASIC15.1■□□□□ 0.01
DUX1O43812 AC009486.1-201ENST00000569860 813 ntBASIC15.1■□□□□ 0.01
DUX1O43812 RPSAP52-203ENST00000622976 1023 ntBASIC15.1■□□□□ 0.01
DUX1O43812 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.1■□□□□ 0.01
DUX1O43812 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.1■□□□□ 0.01
DUX1O43812 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX1O43812 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DUX1O43812 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.1■□□□□ 0.01
DUX1O43812 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX1O43812 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.1■□□□□ 0.01
DUX1O43812 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
DUX1O43812 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.1■□□□□ 0.01
DUX1O43812 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DUX1O43812 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.1■□□□□ 0.01
DUX1O43812 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.09■□□□□ 0.01
DUX1O43812 PRORSD1P-202ENST00000563365 2154 ntBASIC15.09■□□□□ 0.01
DUX1O43812 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
DUX1O43812 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.09■□□□□ 0.01
DUX1O43812 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DUX1O43812 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.09■□□□□ 0.01
DUX1O43812 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DUX1O43812 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DUX1O43812 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
DUX1O43812 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
DUX1O43812 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DUX1O43812 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DUX1O43812 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.09■□□□□ 0.01
DUX1O43812 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
DUX1O43812 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
DUX1O43812 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
DUX1O43812 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms