RNA–Protein interactions for RNA: ENST00000538027.6

CACNA2D4-208, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5 BASIC

Gene CACNA2D4, Length 952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-208ENST00000538027 NISCHQ9Y2I1 1504 aa38.25■■■■□ 3.71
CACNA2D4-208ENST00000538027 ABCC9O60706 1549 aa34.58■■■■□ 3.13
CACNA2D4-208ENST00000538027 CCDC180Q9P1Z9 1646 aa34.28■■■■□ 3.08
CACNA2D4-208ENST00000538027 RB1CC1Q8TDY2 1594 aa32.71■■■□□ 2.83
CACNA2D4-208ENST00000538027 DNAJC5BQ9UF47 199 aa32.59■■■□□ 2.81
CACNA2D4-208ENST00000538027 DCAF8L2P0C7V8 631 aa32.51■■■□□ 2.79
CACNA2D4-208ENST00000538027 NACADO15069 1562 aa32.43■■■□□ 2.78
CACNA2D4-208ENST00000538027 PABPN1Q86U42 306 aaKnown RBP eCLIP32.24■■■□□ 2.75
CACNA2D4-208ENST00000538027 UNC13AQ9UPW8 1703 aa32.1■■■□□ 2.73
CACNA2D4-208ENST00000538027 BICRAQ9NZM4 1560 aa31.86■■■□□ 2.69
CACNA2D4-208ENST00000538027 MYO15BQ96JP2 1530 aa31.86■■■□□ 2.69
CACNA2D4-208ENST00000538027 ZCCHC6Q5VYS8 1495 aaKnown RBP31.66■■■□□ 2.66
CACNA2D4-208ENST00000538027 DCAF1Q9Y4B6 1507 aa31.46■■■□□ 2.63
CACNA2D4-208ENST00000538027 SCRIBQ14160 1630 aa31.42■■■□□ 2.62
CACNA2D4-208ENST00000538027 CC2D2AQ9P2K1 1620 aa31.17■■■□□ 2.58
CACNA2D4-208ENST00000538027 SHROOM4Q9ULL8 1493 aa31.17■■■□□ 2.58
CACNA2D4-208ENST00000538027 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
CACNA2D4-208ENST00000538027 EIF4G1Q04637 1599 aaKnown RBP31.05■■■□□ 2.56
CACNA2D4-208ENST00000538027 NCAPD3P42695 1498 aa29.97■■■□□ 2.39
CACNA2D4-208ENST00000538027 ATAD2BQ9ULI0 1458 aa29.93■■■□□ 2.38
CACNA2D4-208ENST00000538027 SMARCA4P51532 1647 aa29.88■■■□□ 2.37
CACNA2D4-208ENST00000538027 DNAJC5Q9H3Z4 198 aa29.85■■■□□ 2.37
CACNA2D4-208ENST00000538027 ERCC6Q03468 1493 aa29.79■■■□□ 2.36
CACNA2D4-208ENST00000538027 SMARCA2P51531 1590 aa29.76■■■□□ 2.35
CACNA2D4-208ENST00000538027 HMGXB3Q12766 1538 aa29.71■■■□□ 2.35
CACNA2D4-208ENST00000538027 NESP48681 1621 aa29.71■■■□□ 2.35
CACNA2D4-208ENST00000538027 CUX2O14529 1486 aa29.67■■■□□ 2.34
CACNA2D4-208ENST00000538027 BAZ1AQ9NRL2 1556 aaPredicted RBP29.65■■■□□ 2.34
CACNA2D4-208ENST00000538027 BAZ1BQ9UIG0 1483 aaKnown RBP29.62■■■□□ 2.33
CACNA2D4-208ENST00000538027 MROH2BQ7Z745 1585 aa29.55■■■□□ 2.32
CACNA2D4-208ENST00000538027 PEG3Q9GZU2 1588 aa29.49■■■□□ 2.31
CACNA2D4-208ENST00000538027 THOC2Q8NI27 1593 aaKnown RBP29.33■■■□□ 2.29
CACNA2D4-208ENST00000538027 LAMC3Q9Y6N6 1575 aa29.3■■■□□ 2.28
CACNA2D4-208ENST00000538027 KIF21AQ7Z4S6 1674 aa29.28■■■□□ 2.28
CACNA2D4-208ENST00000538027 WIZO95785 1651 aa29.22■■■□□ 2.27
CACNA2D4-208ENST00000538027 PDS5BQ9NTI5 1447 aa29.13■■■□□ 2.25
CACNA2D4-208ENST00000538027 CADPSQ9ULU8 1353 aa29.09■■■□□ 2.25
CACNA2D4-208ENST00000538027 MRC2Q9UBG0 1479 aa28.94■■■□□ 2.22
CACNA2D4-208ENST00000538027 RSF1Q96T23 1441 aaPredicted RBP28.86■■■□□ 2.21
CACNA2D4-208ENST00000538027 WDR62O43379 1518 aa28.86■■■□□ 2.21
CACNA2D4-208ENST00000538027 CEP164Q9UPV0 1460 aa28.8■■■□□ 2.2
CACNA2D4-208ENST00000538027 FANCD2Q9BXW9 1451 aa28.79■■■□□ 2.2
CACNA2D4-208ENST00000538027 TOP2AP11388 1531 aaKnown RBP28.74■■■□□ 2.19
CACNA2D4-208ENST00000538027 CFTRP13569 1480 aa28.72■■■□□ 2.19
CACNA2D4-208ENST00000538027 TRIM41Q8WV44 630 aa28.65■■■□□ 2.18
CACNA2D4-208ENST00000538027 URB2Q14146 1524 aaKnown RBP28.6■■■□□ 2.17
CACNA2D4-208ENST00000538027 CCDC88BA6NC98 1476 aa28.46■■■□□ 2.15
CACNA2D4-208ENST00000538027 PRDM2Q13029 1718 aa28.43■■■□□ 2.14
CACNA2D4-208ENST00000538027 OSCARQ8IYS5 282 aa28.37■■■□□ 2.13
CACNA2D4-208ENST00000538027 ZNF608Q9ULD9 1512 aaPredicted RBP28.3■■■□□ 2.12
CACNA2D4-208ENST00000538027 TOPBP1Q92547 1522 aa28.23■■■□□ 2.11
CACNA2D4-208ENST00000538027 IFT140Q96RY7 1462 aa28.21■■■□□ 2.11
CACNA2D4-208ENST00000538027 DNMBPQ6XZF7 1577 aa28.1■■■□□ 2.09
CACNA2D4-208ENST00000538027 EIF4G3O43432 1585 aaKnown RBP28.08■■■□□ 2.09
CACNA2D4-208ENST00000538027 RIMBP3CA6NJZ7 1639 aa28.07■■■□□ 2.08
CACNA2D4-208ENST00000538027 RIMBP3BA6NNM3 1639 aa28.07■■■□□ 2.08
CACNA2D4-208ENST00000538027 RIMBP3Q9UFD9 1639 aa28.07■■■□□ 2.08
CACNA2D4-208ENST00000538027 ABCC8Q09428 1581 aa28.03■■■□□ 2.08
CACNA2D4-208ENST00000538027 AQRO60306 1485 aaKnown RBP eCLIP28.02■■■□□ 2.081e-6■■■■□ 23.9
CACNA2D4-208ENST00000538027 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
CACNA2D4-208ENST00000538027 POLA1P09884 1462 aaPredicted RBP27.95■■■□□ 2.06
CACNA2D4-208ENST00000538027 ARHGEF11O15085 1522 aa27.94■■■□□ 2.06
CACNA2D4-208ENST00000538027 RAD54L2Q9Y4B4 1467 aa27.94■■■□□ 2.06
CACNA2D4-208ENST00000538027 CHD1O14646 1710 aa27.93■■■□□ 2.06
CACNA2D4-208ENST00000538027 FBLN2P98095 1184 aa27.89■■■□□ 2.06
CACNA2D4-208ENST00000538027 TDRD9Q8NDG6 1382 aaKnown RBP27.85■■■□□ 2.05
CACNA2D4-208ENST00000538027 SOGA1O94964 1423 aa27.82■■■□□ 2.04
CACNA2D4-208ENST00000538027 CYB5RLQ6IPT4 315 aa27.8■■■□□ 2.04
CACNA2D4-208ENST00000538027 FGD5Q6ZNL6 1462 aa27.78■■■□□ 2.04
CACNA2D4-208ENST00000538027 CUX1P39880 1505 aa27.76■■■□□ 2.03
CACNA2D4-208ENST00000538027 SNAPC4Q5SXM2 1469 aa27.7■■■□□ 2.03
CACNA2D4-208ENST00000538027 ARAP1Q96P48 1450 aa27.7■■■□□ 2.02
CACNA2D4-208ENST00000538027 SUPT5HO00267 1087 aaKnown RBP27.65■■■□□ 2.02
CACNA2D4-208ENST00000538027 CHMP7Q8WUX9 453 aaPredicted RBP27.58■■■□□ 2.01
CACNA2D4-208ENST00000538027 WDR97A6NE52 1622 aa27.56■■■□□ 2
CACNA2D4-208ENST00000538027 TRHP20396 242 aaPredicted RBP27.54■■■□□ 2
CACNA2D4-208ENST00000538027 GRIN2BQ13224 1484 aa27.54■■■□□ 2
CACNA2D4-208ENST00000538027 CLASP1Q7Z460 1538 aa27.54■■■□□ 2
CACNA2D4-208ENST00000538027 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■■□□ 2
CACNA2D4-208ENST00000538027 PBRM1Q86U86 1689 aa27.49■■□□□ 1.99
CACNA2D4-208ENST00000538027 SYNJ1O43426 1573 aa27.48■■□□□ 1.99
CACNA2D4-208ENST00000538027 SYNJ2O15056 1496 aa27.46■■□□□ 1.99
CACNA2D4-208ENST00000538027 GAPVD1Q14C86 1478 aa27.46■■□□□ 1.99
CACNA2D4-208ENST00000538027 ABCA10Q8WWZ4 1543 aa27.39■■□□□ 1.98
CACNA2D4-208ENST00000538027 ABCA5Q8WWZ7 1642 aa27.38■■□□□ 1.97
CACNA2D4-208ENST00000538027 WRNQ14191 1432 aaPredicted RBP eCLIP27.25■■□□□ 1.95
CACNA2D4-208ENST00000538027 ERCC6L2Q5T890 1561 aa27.24■■□□□ 1.95
CACNA2D4-208ENST00000538027 BIVM-ERCC5R4GMW8 1640 aa27.23■■□□□ 1.95
CACNA2D4-208ENST00000538027 TOP2BQ02880 1626 aa27.22■■□□□ 1.95
CACNA2D4-208ENST00000538027 GRIN2AQ12879 1464 aa27.21■■□□□ 1.95
CACNA2D4-208ENST00000538027 ADAMTS12P58397 1594 aa27.2■■□□□ 1.94
CACNA2D4-208ENST00000538027 CEP170Q5SW79 1584 aa27.18■■□□□ 1.94
CACNA2D4-208ENST00000538027 NUP160Q12769 1436 aa27.1■■□□□ 1.93
CACNA2D4-208ENST00000538027 FHAD1B1AJZ9 1412 aa27.07■■□□□ 1.92
CACNA2D4-208ENST00000538027 ERICH3Q5RHP9 1530 aa27.01■■□□□ 1.91
CACNA2D4-208ENST00000538027 SHROOM2Q13796 1616 aa27■■□□□ 1.91
CACNA2D4-208ENST00000538027 PRG4Q92954 1404 aaPredicted RBP26.9■■□□□ 1.9
CACNA2D4-208ENST00000538027 JPH4Q96JJ6 628 aa26.87■■□□□ 1.89
CACNA2D4-208ENST00000538027 RUSC2Q8N2Y8 1516 aa26.82■■□□□ 1.88
CACNA2D4-208ENST00000538027 KIF13AQ9H1H9 1805 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms