Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 AC004987.2-201ENST00000395959 1148 ntBASIC13.95□□□□□ -0.18
CDH20Q9HBT6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 IGHV3-42-201ENST00000520410 361 ntBASIC13.95□□□□□ -0.18
CDH20Q9HBT6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 AC140878.1-201ENST00000565277 250 ntBASIC13.95□□□□□ -0.18
CDH20Q9HBT6 AL691432.1-201ENST00000596308 1422 ntBASIC13.95□□□□□ -0.18
CDH20Q9HBT6 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH20Q9HBT6 AC097376.2-205ENST00000610159 5334 ntBASIC13.94□□□□□ -0.18
CDH20Q9HBT6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH20Q9HBT6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH20Q9HBT6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH20Q9HBT6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH20Q9HBT6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH20Q9HBT6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH20Q9HBT6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH20Q9HBT6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH20Q9HBT6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH20Q9HBT6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH20Q9HBT6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH20Q9HBT6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH20Q9HBT6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CDH20Q9HBT6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.93□□□□□ -0.18
CDH20Q9HBT6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH20Q9HBT6 CYP4F24P-201ENST00000586049 1580 ntBASIC13.93□□□□□ -0.18
CDH20Q9HBT6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms