Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
KCNQ3O43525 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC20.17■□□□□ 0.82
KCNQ3O43525 AP001063.1-201ENST00000568332 529 ntBASIC20.17■□□□□ 0.82
KCNQ3O43525 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC20.17■□□□□ 0.82
KCNQ3O43525 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.17■□□□□ 0.82
KCNQ3O43525 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
KCNQ3O43525 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.17■□□□□ 0.82
KCNQ3O43525 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 AL139384.1-201ENST00000612143 3047 ntBASIC20.17■□□□□ 0.82
KCNQ3O43525 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ3O43525 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.17■□□□□ 0.82
KCNQ3O43525 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
KCNQ3O43525 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KCNQ3O43525 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KCNQ3O43525 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.16■□□□□ 0.82
KCNQ3O43525 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KCNQ3O43525 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KCNQ3O43525 TEX30-203ENST00000376022 828 ntTSL 2 BASIC20.16■□□□□ 0.82
KCNQ3O43525 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
KCNQ3O43525 RPL7P3-201ENST00000441388 714 ntBASIC20.16■□□□□ 0.82
KCNQ3O43525 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC20.16■□□□□ 0.82
KCNQ3O43525 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.16■□□□□ 0.82
KCNQ3O43525 AP001582.1-201ENST00000525856 295 ntBASIC20.16■□□□□ 0.82
KCNQ3O43525 MFF-204ENST00000353339 2186 ntTSL 5 BASIC20.16■□□□□ 0.82
KCNQ3O43525 HCG11-201ENST00000411553 5696 ntBASIC20.16■□□□□ 0.82
KCNQ3O43525 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC20.16■□□□□ 0.82
KCNQ3O43525 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.16■□□□□ 0.82
KCNQ3O43525 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KCNQ3O43525 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KCNQ3O43525 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
KCNQ3O43525 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.16■□□□□ 0.82
KCNQ3O43525 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KCNQ3O43525 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KCNQ3O43525 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KCNQ3O43525 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KCNQ3O43525 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
KCNQ3O43525 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.15■□□□□ 0.82
KCNQ3O43525 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC20.15■□□□□ 0.82
KCNQ3O43525 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.15■□□□□ 0.82
KCNQ3O43525 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.15■□□□□ 0.82
KCNQ3O43525 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.15■□□□□ 0.82
KCNQ3O43525 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC20.15■□□□□ 0.82
KCNQ3O43525 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.15■□□□□ 0.82
KCNQ3O43525 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC20.15■□□□□ 0.82
KCNQ3O43525 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC20.15■□□□□ 0.82
KCNQ3O43525 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.15■□□□□ 0.82
KCNQ3O43525 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
KCNQ3O43525 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
KCNQ3O43525 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC20.15■□□□□ 0.82
KCNQ3O43525 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
KCNQ3O43525 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.15■□□□□ 0.82
KCNQ3O43525 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.15■□□□□ 0.82
KCNQ3O43525 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
KCNQ3O43525 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
KCNQ3O43525 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.15■□□□□ 0.82
KCNQ3O43525 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
KCNQ3O43525 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
KCNQ3O43525 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KCNQ3O43525 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
KCNQ3O43525 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
KCNQ3O43525 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
KCNQ3O43525 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
KCNQ3O43525 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
KCNQ3O43525 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
KCNQ3O43525 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
KCNQ3O43525 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC20.14■□□□□ 0.82
KCNQ3O43525 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.14■□□□□ 0.81
KCNQ3O43525 TKT-202ENST00000423516 2075 ntTSL 2 BASIC20.14■□□□□ 0.81
KCNQ3O43525 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KCNQ3O43525 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KCNQ3O43525 AC020916.1-201ENST00000587762 1774 ntBASIC20.14■□□□□ 0.81
KCNQ3O43525 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
KCNQ3O43525 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.14■□□□□ 0.81
KCNQ3O43525 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KCNQ3O43525 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
KCNQ3O43525 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KCNQ3O43525 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KCNQ3O43525 MIR1908-201ENST00000410394 80 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms