Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.06■□□□□ 0.16
WNT3AP56704 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
WNT3AP56704 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
WNT3AP56704 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3AP56704 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.06■□□□□ 0.16
WNT3AP56704 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.06■□□□□ 0.16
WNT3AP56704 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.05■□□□□ 0.16
WNT3AP56704 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
WNT3AP56704 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.05■□□□□ 0.16
WNT3AP56704 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.05■□□□□ 0.16
WNT3AP56704 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
WNT3AP56704 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.05■□□□□ 0.16
WNT3AP56704 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.05■□□□□ 0.16
WNT3AP56704 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.05■□□□□ 0.16
WNT3AP56704 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
WNT3AP56704 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.05■□□□□ 0.16
WNT3AP56704 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.05■□□□□ 0.16
WNT3AP56704 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.05■□□□□ 0.16
WNT3AP56704 GPALPP1-207ENST00000611650 899 ntBASIC16.05■□□□□ 0.16
WNT3AP56704 AL138828.2-201ENST00000615812 383 ntBASIC16.05■□□□□ 0.16
WNT3AP56704 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
WNT3AP56704 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.05■□□□□ 0.16
WNT3AP56704 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
WNT3AP56704 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.04■□□□□ 0.16
WNT3AP56704 AL607033.1-201ENST00000623900 1599 ntBASIC16.04■□□□□ 0.16
WNT3AP56704 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3AP56704 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3AP56704 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.04■□□□□ 0.16
WNT3AP56704 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3AP56704 AC105250.1-201ENST00000509378 2057 ntBASIC16.04■□□□□ 0.16
WNT3AP56704 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.04■□□□□ 0.16
WNT3AP56704 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3AP56704 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3AP56704 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
WNT3AP56704 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
WNT3AP56704 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3AP56704 FO538757.1-201ENST00000623083 1397 ntBASIC16.04■□□□□ 0.16
WNT3AP56704 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3AP56704 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3AP56704 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3AP56704 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.04■□□□□ 0.16
WNT3AP56704 AC107890.1-201ENST00000422478 521 ntBASIC16.04■□□□□ 0.16
WNT3AP56704 FAM86GP-201ENST00000448322 971 ntBASIC16.04■□□□□ 0.16
WNT3AP56704 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.04■□□□□ 0.16
WNT3AP56704 AC067863.1-201ENST00000494933 530 ntBASIC16.04■□□□□ 0.16
WNT3AP56704 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.04■□□□□ 0.16
WNT3AP56704 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3AP56704 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.04■□□□□ 0.16
WNT3AP56704 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.04■□□□□ 0.16
WNT3AP56704 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.04■□□□□ 0.16
WNT3AP56704 AC140878.1-201ENST00000565277 250 ntBASIC16.04■□□□□ 0.16
WNT3AP56704 AC073592.8-201ENST00000624126 511 ntBASIC16.04■□□□□ 0.16
WNT3AP56704 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.04■□□□□ 0.16
WNT3AP56704 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.04■□□□□ 0.16
WNT3AP56704 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
WNT3AP56704 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.04■□□□□ 0.16
WNT3AP56704 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.04■□□□□ 0.16
WNT3AP56704 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
WNT3AP56704 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.04■□□□□ 0.16
WNT3AP56704 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.04■□□□□ 0.16
WNT3AP56704 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3AP56704 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3AP56704 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.04■□□□□ 0.16
WNT3AP56704 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT3AP56704 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
WNT3AP56704 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.03■□□□□ 0.16
WNT3AP56704 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms