Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC27P30260 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC27P30260 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.4■□□□□ 0.54
CDC27P30260 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDC27P30260 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.4■□□□□ 0.54
CDC27P30260 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDC27P30260 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.4■□□□□ 0.54
CDC27P30260 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CDC27P30260 AC013268.4-201ENST00000637413 2228 ntBASIC18.4■□□□□ 0.54
CDC27P30260 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.4■□□□□ 0.54
CDC27P30260 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC27P30260 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC27P30260 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDC27P30260 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDC27P30260 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC27P30260 MRPS18AP1-201ENST00000414458 589 ntBASIC18.4■□□□□ 0.54
CDC27P30260 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.4■□□□□ 0.54
CDC27P30260 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.4■□□□□ 0.54
CDC27P30260 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.4■□□□□ 0.54
CDC27P30260 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDC27P30260 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC27P30260 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC27P30260 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC27P30260 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.4■□□□□ 0.54
CDC27P30260 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDC27P30260 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC27P30260 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDC27P30260 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CDC27P30260 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CDC27P30260 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDC27P30260 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.39■□□□□ 0.54
CDC27P30260 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDC27P30260 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDC27P30260 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDC27P30260 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.39■□□□□ 0.54
CDC27P30260 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC27P30260 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDC27P30260 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.39■□□□□ 0.53
CDC27P30260 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC27P30260 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDC27P30260 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC27P30260 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDC27P30260 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC27P30260 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC27P30260 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDC27P30260 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.39■□□□□ 0.53
CDC27P30260 ZNF890P-202ENST00000530367 1156 ntBASIC18.39■□□□□ 0.53
CDC27P30260 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.39■□□□□ 0.53
CDC27P30260 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.39■□□□□ 0.53
CDC27P30260 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CDC27P30260 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDC27P30260 AC008738.7-201ENST00000609744 511 ntBASIC18.39■□□□□ 0.53
CDC27P30260 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.39■□□□□ 0.53
CDC27P30260 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC27P30260 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC27P30260 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC27P30260 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CDC27P30260 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.39■□□□□ 0.53
CDC27P30260 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
CDC27P30260 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDC27P30260 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.39■□□□□ 0.53
CDC27P30260 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
CDC27P30260 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDC27P30260 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC27P30260 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDC27P30260 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC27P30260 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.39■□□□□ 0.53
CDC27P30260 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC27P30260 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC27P30260 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC27P30260 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC27P30260 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC27P30260 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDC27P30260 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC27P30260 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.38■□□□□ 0.53
CDC27P30260 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDC27P30260 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC27P30260 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC27P30260 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDC27P30260 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC27P30260 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC27P30260 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC27P30260 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC27P30260 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC27P30260 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC27P30260 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDC27P30260 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.38■□□□□ 0.53
CDC27P30260 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.38■□□□□ 0.53
CDC27P30260 RPL13P2-201ENST00000440687 659 ntBASIC18.38■□□□□ 0.53
CDC27P30260 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC27P30260 SPDYE18-201ENST00000510091 1050 ntBASIC18.38■□□□□ 0.53
CDC27P30260 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC27P30260 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC27P30260 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDC27P30260 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC27P30260 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.38■□□□□ 0.53
CDC27P30260 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.38■□□□□ 0.53
CDC27P30260 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC27P30260 AC004840.1-201ENST00000636359 365 ntBASIC18.38■□□□□ 0.53
CDC27P30260 AC011270.2-201ENST00000624293 2550 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms