Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SPDYE12P-201ENST00000618416 771 ntBASIC14.18□□□□□ -0.14
TRAF3IP2O43734 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
TRAF3IP2O43734 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 KRT18P28-201ENST00000453838 1332 ntBASIC14.17□□□□□ -0.14
TRAF3IP2O43734 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 FO393414.2-201ENST00000405153 598 ntBASIC14.17□□□□□ -0.14
TRAF3IP2O43734 AC136604.1-201ENST00000418535 575 ntBASIC14.17□□□□□ -0.14
TRAF3IP2O43734 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 AC125807.1-201ENST00000483097 614 ntBASIC14.17□□□□□ -0.14
TRAF3IP2O43734 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF3IP2O43734 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 KLF2P3-201ENST00000451977 1087 ntBASIC14.16□□□□□ -0.14
TRAF3IP2O43734 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 AC092183.1-201ENST00000469884 875 ntBASIC14.16□□□□□ -0.14
TRAF3IP2O43734 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 HLA-V-204ENST00000476601 1289 ntBASIC14.16□□□□□ -0.14
TRAF3IP2O43734 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms