Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 BEND3P1-201ENST00000421591 1944 ntBASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC6LQ2NKX8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 AC087641.1-201ENST00000557561 1021 ntBASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC6LQ2NKX8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 AL353732.1-201ENST00000569618 1459 ntBASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 HSPA7-201ENST00000445535 1927 ntBASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 ZBED1P1-201ENST00000502364 1930 ntBASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 CICP17-201ENST00000418553 2377 ntBASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ERCC6LQ2NKX8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ERCC6LQ2NKX8 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ERCC6LQ2NKX8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ERCC6LQ2NKX8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.91■□□□□ 0.3
ERCC6LQ2NKX8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ERCC6LQ2NKX8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ERCC6LQ2NKX8 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ERCC6LQ2NKX8 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms