Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.32■□□□□ 0.04
SH3BGRP55822 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3BGRP55822 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.32■□□□□ 0.04
SH3BGRP55822 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.32■□□□□ 0.04
SH3BGRP55822 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.32■□□□□ 0.04
SH3BGRP55822 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.32■□□□□ 0.04
SH3BGRP55822 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.32■□□□□ 0.04
SH3BGRP55822 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.32■□□□□ 0.04
SH3BGRP55822 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.32■□□□□ 0.04
SH3BGRP55822 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.32■□□□□ 0.04
SH3BGRP55822 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.32■□□□□ 0.04
SH3BGRP55822 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.32■□□□□ 0.04
SH3BGRP55822 LINC00552-201ENST00000625151 2579 ntBASIC15.32■□□□□ 0.04
SH3BGRP55822 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3BGRP55822 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3BGRP55822 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3BGRP55822 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3BGRP55822 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3BGRP55822 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
SH3BGRP55822 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SH3BGRP55822 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.32■□□□□ 0.04
SH3BGRP55822 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3BGRP55822 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SH3BGRP55822 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3BGRP55822 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3BGRP55822 AC016027.1-202ENST00000607927 1699 ntBASIC15.32■□□□□ 0.04
SH3BGRP55822 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 AL023775.1-201ENST00000454907 1746 ntBASIC15.31■□□□□ 0.04
SH3BGRP55822 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SH3BGRP55822 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.31■□□□□ 0.04
SH3BGRP55822 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 AC112504.1-201ENST00000623415 1841 ntBASIC15.31■□□□□ 0.04
SH3BGRP55822 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SH3BGRP55822 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SH3BGRP55822 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3BGRP55822 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3BGRP55822 LINC02447-202ENST00000501888 2146 ntBASIC15.31■□□□□ 0.04
SH3BGRP55822 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3BGRP55822 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3BGRP55822 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.31■□□□□ 0.04
SH3BGRP55822 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3BGRP55822 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3BGRP55822 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SH3BGRP55822 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3BGRP55822 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.31■□□□□ 0.04
SH3BGRP55822 AC073648.2-201ENST00000510116 352 ntBASIC15.31■□□□□ 0.04
SH3BGRP55822 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3BGRP55822 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.31■□□□□ 0.04
SH3BGRP55822 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SH3BGRP55822 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3BGRP55822 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3BGRP55822 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3BGRP55822 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3BGRP55822 CDC14C-201ENST00000428251 1719 ntBASIC15.31■□□□□ 0.04
SH3BGRP55822 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.31■□□□□ 0.04
SH3BGRP55822 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SH3BGRP55822 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.31■□□□□ 0.04
SH3BGRP55822 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.31■□□□□ 0.04
SH3BGRP55822 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH3BGRP55822 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SH3BGRP55822 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SH3BGRP55822 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SH3BGRP55822 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3BGRP55822 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3BGRP55822 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3BGRP55822 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3BGRP55822 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3BGRP55822 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3BGRP55822 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3BGRP55822 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.3■□□□□ 0.04
SH3BGRP55822 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SH3BGRP55822 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
SH3BGRP55822 AL645728.1-201ENST00000366221 2101 ntBASIC15.3■□□□□ 0.04
SH3BGRP55822 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms